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PCT 



WORLD INTELLECTUAL PROPERTY ORGANIZATION 
International Bureau 



INimNA'nONAL APPLICATIONT>UBUSHED UNDER THE PATENT COOPERATION TREATY (PCT) 



(51) International Patent Classification 6 : 

C12N 15/12, 15/62, C07K 14/47, 16/18, 



G01N 33/53 



Al 



(11) International Publication Number: WO 95727059 

(43) International Publication Date: 12 October 1995 (12.10.95) 



(21) International Application Number: PCT/US95/04O75 

(22) International Filing Date: 31 March 1995 (31.03.95) 



(30) Priority Data: 
08/222,619 



31 March 1994 (31.03.94) 



US 



(71) Applicants: AMGEN INC. [US/US]; Amgen Center, 1840 

Dehavilland Drive, Thousand Oaks, CA 91320-1789 (US). 
TOE ROCKEFELLER UNIVERSITY [US/US]; 1230 York 
Avenue, New York, NY 10021-6399 (US). 

(72) Inventors: LICHENSTEIN, Henri, Stephen; 9586 Lucerne 

Street, Ventura, CA 93004 (US). LYONS, David, Edwin; 
2027 Truett Circle, Thousand Oaks, CA 91320-1789 (US). 
WURFEL, Mark, Matsuo; 420 E. 70 Street, New York, NY 
10021 (US). WRIGHT, Samuel, Donald; 2 Briar Close, 
Larchmont, NY 10538 (US). 

(74) Agents: ODRE, Steven, M. et al.; Amgen Inc., Amgen Center, 
1840 Dehavilland Drive, Thousand Oaks, CA 91320-1789 
(US). 



(81) Designated States: AM, AT, AU, BB, BG, BR, BY, CA, CH, 
CN, CZ, DE, DK, EE, ES, FI, GB, GE, HU, JP, KE, KG, 
KP, KR, KZ, LK, LR, LT, LU, LV, MD, MG, MN, MW, 
MX, NL, NO, NZ, PL, FT, RO, RU, SD, SE, SG, SI, SK, 
TJ, TM, TT, UA, UG, UZ, VN, European patent (AT, BE, 
CH, DE, DK, ES, FR, GB, GR, IE, IT, LU, MC, NL, FT, 
SE), OAPI patent (BF, BJ, CF, CG, CI, CM, GA, GN, ML, 
MR, NE, SN, TO, TG), ARIPO patent (KE, MW, SD, SZ, 
UG). 



Published 

With international search report 

Before the expiration of the time limit for amending the 
claims and to be republished in the event of the receipt of 
amendments. 



(54) Title: AFAMIN: A HUMAN SERUM ALBUMIN-LIKE PROTEIN 



(57) Abstract 

The invention relates to a novel human serum protein referred to as AFM, which has one or more activities in common with human 
serum albumin, human a-fetoprotein, or human vitamin D binding protein and which has an apparent molecular weight by SDS-PAGE of 
87 kd; variants thereof; and related genes, vectors, cells and methods. 



FOR THE PURPOSES OF INFORMATION ONLY 



Codes used to identify States party to the PCT on the front pages of pamphlets publishing international 
applications under the PCT. 



AT 


Austria 


GB 


United Kingdom 


MR 


Mauritania 


AU 


Australia 


GE 


Georgia 


MW 


Malawi 


BB 


Barbados 


GN 


Guinea 


NE 


Niger 


BE 


Belgium 


GR 


Greece 


NL 


Netherlands 


BF 


Burkina Faso 


HU 


Hungary 


NO 


Norway 


BG 


Bulgaria 


IE 


Ireland 


NZ 


New Zealand 


BJ 


Benin 


IT 


Italy 


PL 


Poland 


BR 


Brazil 


JP 


Japan 


PT 


Portugal 


BY 


Belarus 


KE 


Kenya 


RO 


Romania 


CA 


Canada 


KG 


Kyrgystan 


RU 


Russian Federation 


CF 


Central African Republic 


KP 


Democratic People's Republic 


SD 


Sudan 


CG 


Congo 




of Korea 


SE 


Sweden 


CH 


Switzerland 


KR 


Republic of Korea 


SI 


Slovenia 


CI 


Cote d'lvoire 


KZ 


Kazakhstan 


SK 


Slovakia 


CM 


Cameroon 


LI 


Liechtenstein 


SN 


Senegal 


CN 


China 


LK 


Sri Lanka 


TD 


Chad 


CS 


Czechoslovakia 


LU 


Luxembourg 


TG 


Togo 


CZ 


Czech Republic 


LV 


Latvia 


TJ 


Tajikistan 


DE 


Germany 


MC 


Monaco 


TT 


Trinidad and Tobago 


DK 


Denmark 


MD 


Republic of Moldova 


UA 


Ukraine 


ES 


Spain 


MG 


Madagascar 


US 


United States of America 


Fl 


Finland 


ML 


Mali 


uz 


Uzbekistan 


FR 


France 


MN 


Mongolia 


VN 


Viet Nam 


GA 


Gabon 











WO 95/27059 



PCT/US95/04075 



AFAMIN: A HUMAN SERUM ALBUMIN-LIKE PROTEIN 

Fieia of the invention 

5 

Generally, the invention relates to the field 
of human serum proteins that are functionally and ■ 
structurally similar to the related proteins: human 
serum albumin (ALB) , human a- fetoprotein (AFP), and 
10 vitamin D-binding protein (VDB) . 

Background of the Invention 

The human serum proteins albumin (ALB) , 
15 a -feto-protein (AFP) and vitamin D binding protein (VDB) 

are known to be members of a multigene ALB family. All 
three proteins are found in serum where they mediate the 
transport of a wide variety of ligands . ALB binds fatty 
acids, amino acids, steroids, glutathione, metals, 

20 bilirubin, lysolecithin, hematin, prostaglandins and 
pharmaceuticals (for review, see 1) . AFP binds fatty 
acids, bilirubin and metals (2, 3) . VDB binds vitamin D 
and its metabolites as well as fatty acids, actin, C5a 
and C5a des Arg. (4-7) • 

25 In addition to their transport capabilities, 

ALB family proteins possess a wide assortment of other 
functional activities. ALB is the main contributor to 
the colloid oncotic pressure of plasma, acts as a 
scavenger of oxygen-free radicals and can inhibit 

30 copper-stimulated lipid peroxidation, hydrogen peroxide 
release, and neutrophil spreading (1, 8-10) . AFP has 
been implicated in the regulation of immune processes 
(11-14) and VDB can act as a co-chemotactic factor for 
neutrophils (6, 15) and as an activating factor for 

35 macrophages (16) . 



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The serum levels of ALB family proteins are 
also known to be responsive to various pathological 
conditions. ALB is a negative acute phase protein (17) 
whose levels decrease in times of stress. AFP levels are 
5 elevated in women carrying fetuses with certain 

developmental disorders (18, 19) and in individuals with 
hepatocarcinoma, teratocarcinoma, hereditary tyrosinemia 
or ataxia-telangiectasia (20-24) . VDB levels are 
decreased in patients with septic shock (25) or 

10 fulminant hepatic necrosis (26, 27) . 

ALB family members also have significant 
structural similarities. Homology has been observed at 
the primary amino acid sequence level and there is also 
a well-conserved pattern of Cys residues which predicts 

15 similar secondary structures (28-32) . ALB family genes 
have similar exon/intron organizations (33-36) and all 
have been mapped to human chromosome 4„ within the region 
4qll-q22 (37; 38) . 

Human "Afamin" (abbreviated as "AFM") is a 

20 novel serum protein with a molecular weight of 87000 

daltons. It shares strong similarity to albumin- family 
members and has the characteristic pattern of disulfide 
bonds observed in this family. In addition, the gene 
maps to chromosome 4 as do other members of the albumin 

25 gene family. Thus, AFM is the fourth member of the 
albumin family of proteins . AFM cDNA was stably 
transfected into Chinese hamster ovary cells and 
recombinant protein (rAFM) was purified from conditioned 
medium. Both rAFM and AFM purified from human serum 

30 react with a polyclonal antibody that was raised against 
a synthetic peptide derived from the deduced amino acid 
sequence of AFM. It is expected that AFM will have 
properties and biological activities in common with ALB, 
AFP, and VDB. 



35 



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Pnhlirations relating to "Background of the Invention" 

1. Peters, T. Jr., Adv. Protein Chem. 37, 161 - 245 
(1985) . 

5 

2. - Parmelee, D.C., Evenson, M.A., and Deutsch, H.F.. J. 
Biol. Chem. 253, 2114 - 2119 (1978). 

3. Berde, C.B., Nagai, M. , Deutsch, H.F., J. Biol. 
10 Chem. 254, 12609 - 12614 (1979) . 

4. Daiger, S.P., Schanfield, M.S., and Cavalli-Sforza, 
L.L., Proc. Nat. Acad. Sci. U.S.A. 72, 2076 t 2080 
(1975) . 

15 

5. Van Baelen, H., Bouillon, R. , and De Moor, P., J". 
Biol. Chem. 255, 2270 - 2272 (1980). 

6. Kew, R.R., and Webster, R.O., J. Clin. Invest. 82, 
20 364 - 369 (1988) . 

7. Williams, M.H., Van Alstyne, E.L., and Galbraith, 
R.M., Biochem. Bipophys. Res. Commun. 153, 1019 - 1024 
(1988) . 

25 

8. Holt, M.E., Ryall, M.E.T., and Campbell, A.K., Br. 
J. exp. Path. 65, 231 - 241 (1948) . 

9. Gutteridge, J.M.C., Biochim. Biophys ACTA 869, 119 
30 -127 (1986) . 

10. Nathan, C, Xie, Q-W. , Halbwachs-Mecarelli, L. and 
Jin, W.W., J. Cell Biol. 122, 243-256 (1993). 

35 11. Yachnin, S., Proc. Natl. Acad. Sci. U.S.A. 73, 2857 
- 2861 (1976) . 



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12. Auer, I.O., and Kress, H.G., Cell. Immunol. 30, 173 

- 179 (1977) . 

5 13, Alpert, E., Dienstag, J.L., Sepersky, S., Littman f 
B., -and Rocklin, R., Immunol . Commun . 7, 163 - 185 
(1978) . 

14, Chakraborty, M., and Mandal, C, Immunol. Invest. 
10 22, 329 - 339 (1993) . 

15. Perez, H.D., Kelly, E., Chenoweth, D., and Elf man, 
F . , J. Clin. Invest. 82, 360 - 363 (1988). 

15 16. Yamamoto, N. and Homma, S., Proc. Natl. Acad. Sci. 
U.S.A. 88, 8539 - 8543 (1991). 

17. Koj, A., in The Acute Phase Response to Injury and 
Infection 1 (Gordon, A.H., and Koj, A. eds) pp. 45 - 160 ' 

20 (1985) . 

18. Brock, D.J.H., and Sutcliffe, R.G., Lancet 2, 197 

- 199 (1972) . 

25 19. Allan, L.D., Ferguson-Smith, M.A., Donald, I., 
Sweet, E.M. and Gibson, A. A.M., Lancet 2 522 - 525 
(1973) . 

20. Waldmann, T.A., and Mclntire, K.R., Lancet 2, 1112 
30 - 1115 (1972) . 

21. Belanger, L., Belanger, M. , Prive, L., Larochelle, 
J., Tremblay, M. , and Aubin, G., Pathol. Biol. 21, 449 - 
455 (1973). 

35 

22. Belanger, L., Pathol. Biol. 21, 457 - 463 (1973). 



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23. Ruoslahti, E . , Pihto, H., and Seppala, M. , 
Transplant. Rev. 20, 38 - 60 (1974). 

5 24. Tamaoki, T . , and Fausto, in Recombinant DNA and 
Cell Proliferation (Stein G. and Stein J. eds.) pp. 145 
- 168 (1984) . 

25. Lee, W.M., Reines, D., Watt, G.H., Cook, J. A. , 

10 Wise, W.C., Halushka, P.V., and Galbraith, R.M., Circ. 
Shock. 28, 249 - 255 (1989). 

26. Young, W.O., Golds chmidt-Clermont, P. J., Emerson, 
D.L., Lee, W.M., Jollow, D . J . , and Galbraith, R.M., Lab. 

15 Clin. Med. 110, 83 - 90 (1987). 

27. Golds chmidt-Clermont, P.J., Lee, W.M., and 
Galbraith, R.M., Gastroenterology 94, 1454 - 1458 
(1988) . 

20 

28. Lawn, R.M., Adelman, J. , . Bock, S.C., Franke, A.E., 
Houck, CM. , Najarian, R.C., Seeburg, P.H., and Wion, 
K.L., Nucleic Acid Res. 9, 6103 - 6114 (1981). 

25 29. Dugaiczyk, A., Law, S.W., and Dennison, O.E., Proc. 
Natl. Acad. Sci. U.S.A. 79, 71 - 75 (1982). 

30. Morinaga, T . , Sakai, M. , Wegmann, T.G., and 
Tamaoki, T., Proc. Natl. Acad. Sci. U.S.A. 80, 4604 - 

30 4608 (1983) . 

31. Cooke, N.E. and David, E.V., J. Clin. Invest. 76, 
2420 - 2424 (1985) . 



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— o- 



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32. Yang, F., Brune, J.L., Naylor, S.L., Cupples, R.L., 
Naberhaus, K.H. , and Bowman, B.H., Proc. Natl. Acad. 
Sci. U.S.A. 82, 7994 - 7998 (1985). 

5 33. Sakai, M. , Morinaga, T., Urano, Y. , Watanabe, K., 
Wegmann, T.G., and Tamaoki, T., J*. Biol. Chem. 260, 5055 
- 5060 (1985) . 

34. Minghetti, P.P., Ruffner, D.E., Kuang, W-J., 
10 Dennison, O.E., Hawkins, J.W., Beattie, W.G., and 

Dugiaczyk, A., J. Biol. Chem. 261, 6747 - 6757 (1986). 

35. Gibbs, P.E.M., Zielinski, R. , Boyd, C, and 
Dugaiczyk, A., Biochemistry 26, 1332 - 1343 (1987). 

15 

36. Witke, W.F., Gibbs, P.E.M., Zielinski, R., Yang, 

F . , Bowman, B.H., and Dugaiczyk, A., Genomics 16, 751 - 
754 (1993) . 

20 37. Mikkelsen, M. , Jacobsen, P. and Henningsen, K. , 
Hum. Hered. 27, 105 - 107 (1977) . 

38. Harper, M.E., and Dugaiczyk, A., Am. J. Hum. Genet. 
35, 565-572 (1983) . 

25 

The sections below contain a summary of 
background information that is currently available on 
ALB, AFP, and VDB and contains lists of additional 
publications relating to these known proteins. 

30 

I. Human Serum Albumin 

Human serum albumin is an important factor in 
the regulation of plasma volume and tissue fluid balance 
35 through its contribution to the colloid osmotic pressure 
of plasma. Albumin normally constitutes 50-60% of 



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plasma proteins and because of its relatively low 
molecular weight (66,300-69,000), exerts 80-85% of the 
colloidal osmotic pressure of the blood. 

The best known functions of ALB involve 
5 regulation of transvascular fluid flux and hence, intra 
and extravascular fluid volumes and transport of lipid 
and lipid-soluble substances. ALB solutions are • 
frequently used for plasma volume expansion ' and 
maintenance of cardiac output in the treatment of 

10 certain types of shock or impending shock including 
those resulting from burns, surgery, hemorrhage, or 
other trauma or conditions in which a circulatory volume 
deficit is present. Transfusions of whole blood or red 
blood cells also may be necessary, depending on the 

15 severity of red blood cell loss. 

Intravenous (IV) administration of 
concentrated ALB solutions causes a shift of fluid from 
the interstitial spaces into the circulation and a 
slight increase in the concentration of plasma proteins. 

20 When administered IV to a well-hydrated patient, each 
volume of 25% ALB solution draws about 3.5 volumes of 
additional fluid into the circulation within 15 minutes, 
reducing hemoconcentration and blood viscosity. In 
patients with reduced circulating blood volumes (as from 

25 hemorrhage or loss of fluid through exudates or into 
extravascular spaces), hemodilution persists for many 
hours, but in patients with normal blood volume, excess 
fluid and protein are lost from the circulation ■ within a 
few hours. In dehydrated patients, ALB generally 

30 produces little or no clinical improvement unless 
additional fluids are administered. 

Although ALB contains some bound amino acids, 
it provides only modest nutritive effect. ALB binds and 
functions as a carrier of intermediate metabolites 

35 (including bilirubin), trace metals, some drugs, dyes, 
fatty acids, hormones, and enzymes, thus affecting the 



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transport , inactivation, and/or exchange of tissue 
products . 

ALB is also involved in a number of other 
vital functions, some of which have only recently been 
5 suggested and perhaps others which are as yet 

unrecognized. Among recognized unique features of 
albumin are: a) binding, and hence, inactivation of 
toxic products; b) regulation of the plasma and 
interstitial fluid concentrations of endogenous and 

10 exogenously administered substances and drugs; c) 
involvement in anticoagulation; d) maintenance of 
microvascular permeability to protein; and e) scavenging 
of free radicals and prevention of lipid peroxidation. 
This latter property may prove to be critically 

15 important, particularly in inflammatory disease states 

in which free radicals are thought to be a major culprit 
in direct damage due to tissue oxidation, and indirect 
tissue damage due to inactivation of important 
antiproteinases such as ai~PI and AT-III. 

20 

The following is a more detailed summary of 
the many uses for ALB that have been reported in the 
literature : 

25 a. Functions pf ALB 

• Contributes to colloid osmotic pressure 
and thus prevents water loss from circulation; 

30 • Aids in transport, distribution, 

metabolism of fatty acids (primarily long chain) , amino 
acids (Cys and Trp) , steroids, glutathione, metals (Ca, 
Zn) , bilirubin, lysolecithin, hematin, prostaglandins 
and pharmaceuticals to liver, intestine, kidney and 

35 brain presumably through specific albumin receptors that 
have been identified on the endothelium; 



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Serves as a reservoir for fatty acids 
intra and extravascularly (60% of the ALB is found 
extravascularly) ; 

5 

• Modification of doxorubicin (DXR) by 
conjugating it to bovine serum albumin (BSA) improved 
chemotherapeutic efficiency of DXR presumably by 
decreasing efflux of BSA-DXR compared to DXR alone (in 

10 animal models), suggesting a similar use with ALB; 

• Inhibits Cu-stimulated lipid peroxidation 
and hemolysis of erythrocyte membranes (acts as 
antioxidant) ; 

15 

Scavenges HOC1 and peroxy radicals; 

Prevents peroxidation of fatty acids by 
binding to them; 

20 

May exert a protective effect in body 
fluids that have little endogenous antioxidant 
protection (e.g., eye and cerebrospinal fluids) ; 

25 • In urine, high levels of ALB are 

diagnostic for detection of early renal pathology in 
diabetics; 

• Administered to combat shock and given to 
30 neonates with respiratory distress syndrome; 

Administered as a vehicle for hematin to 
treat acute intermittent porphyria; 



35 • Used in tissue culture in place of whole 

serum; 



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Enhances effectiveness of superoxide 
dismutase (SOD) when coupled to SOD through enhanced 
serum half -life; 

5 

♦ In microsphere form, ALB is useful as a 
carrier of therapeutic agents; 

• Inhibits hydrogen peroxide release and 
10 neutrophil spreading. 

B. publications relating tQ ALB 

15 38. Peters, Theodore in ALBUMIN An Overview and 
Bibliography, Second Edition, 1992. 

39. American" Hospital Formulary Service Drug 
Information, Blood Derivatives, 762-763 (1992) . 

20 

40. Yamashita, T. , etal., Biochem. Biophys. Res. 
Commun. 191 (2), 715-720 (1993). 

41. Candlish, John K., Pathology 25, 148-151 (1993). 

25 

42. Ohkawa, K., et al., Cancer Research 54, 4238-4242 
(1993) . 

43. He, Xiao Min and Carter, Daniel C, Nature 358, 
30 209-215 (1992) . 

44. Brown, J. M. , et al . , . Inflammation 13 (5), 583-589 
(1989) . 

35 45. Emerson, T. E., Critical Care Medicine 17 (7), 690- 
694 (1989) . 



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46. Halliwell, Barry, Biochem. Pharmacol. 37 (4), 569- 
571 (1988) . 

5 47. Holt, M. E . , et al., Br. J". Exp. Path. 65, 231-241 
(1984). 

II. Alpha Fetoprotein 

10 Alpha-f etoprotein (AFP; molecular weight 

70,000) is a major serum protein produced during 
development and is produced primarily by the fetal liver 
and yolk sac cells. Its synthesis decreases markedly 
after birth and only trace amounts are present in the 

15 serum of adults. Increased adult serum levels are a 

sign of hepatoma or yolk sac tumor, since these tumors 
produce AFP. The specific associations of AFP with 
fetal development as well as the above type of 
malignancies has attracted much interest and many 

20 studies have been done on the structure of AFP and its 
gene, the regulation of gene expression, and biological 
functions . 

Similar to ALB, AFP has been shown to bind 
various ligands such as unsaturated fatty acids, 
25 estrogens, bilirubin, copper and' nickel ions, and 

others . AFP also has been claimed to regulate immune 
processes in a variety of systems from many different 
laboratories, although the results are controversial. 

The following is a more detailed list of uses 
30 for AFP that are available in the literature: 

a. Functions of AFP 

• Binds unsaturated fatty acids, estrogens, 
35 bilirubin, Cu, Ni; 



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Elevated levels in amniotic fluid of 
pregnant women indicative of fetal malformations; 

• High levels also found in hereditary 
5 tyrosinemia and ataxia-telangiectasia (autosomal 

recessive disorder characterized by a defect in tissue 
differentiation of thymus and liver) ; 

Inhibits NK cell activity; 

10 

• Induces T suppressor cells; 

• Inhibits mitogenic responses of 
lymphocytes to PHA and ConA; 

15 

Inhibits T cell proliferation to la 

determinants ; 

• Decreases macrophage phagocytosis and la 
20 expression; 

Inhibits FSH-mediated estradiol 
production by porcine granulosa cells; 

25 • Enhances growth-factor mediated cell 

proliferation of porcine granulosa cells. 

B. Publications relating to AFP 

30 48. Suzuki, Y., et al., J". Clin. Invest. 90, 

1530-1536 (1992) . 



49. Sakai, M., et al., J. Biol. Chem. 260 
(8) , 5055-5060 (1985) . 

35 



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50. EPO Patent Application No. 0353814, 
February 7, 1990. 

in. vitemin-p Binding Protein 

5 

The group-specific component (Gc; VDB) is an 
a2~globulin of molecular weight 51,000. It is 
synthesized in the liver and is the major vitamin D- 
binding protein in plasma. VDB appears in human 

10 populations as three common genetic phenotypes: Gel, 

Gc2, and Gc2-1. VDB has also been reported to bind G- 
actin and to be spatially associated with IgG on 
lymphocyte membranes . 

The following is a more detailed list of uses 

15 for VDB that are available in the literature: 

A. Functions of VDB 

• Binds seco-steroid, vitamin D and the 
20 derivatives 25-hydroxy vitamin D and 1,25 hydroxy 

vitamin D, possibly for transport in plasma; 

• 1,25 vitamin D can differentiate 
monocytes and VDB prevents this; 

25 

• Binds actin (prevents assembly of actin 

polymers) ; 

Binds unsaturated fatty acids (e.g., 
30 arachidonic acid) ; 

• Binds C5a and C5a des Arg to act as a 
cochemotactic factor for neutrophils; 

35 • Acts as an activating factor for 

macrophages. 



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B. Publication relating to VDB 

51. Watt, G. H., et al., Circulatory Shock 
5 28, 279-291 (1989) . 

The protein of the present invention, AFM, 
bears a strong similarity in structure to ALB, AFP, and 
VDB, and is therefore expected to share the above 
10 utilities and activities with the known proteins 
discussed above. 

Summary of the Invention 

15 In the course of experiments designed to 

purify a serum protein which could inhibit the binding 
of lipopolysaccharide (LPS) -coated erythrocytes to human 
macrophages, the inventors purified a novel human 
protein that co-purifies with apolipoprotein Al (ApoAl) . " 

20 The novel protein has an apparent molecular weight of 
87,000 when run on SDS-PAGE and is designated as AFM. 
Herein, the inventors describe the cloning of the cDNA 
for AFM and demonstrate that AFM has a striking 
similarity, both structurally and functionally/ to other 

25 members of the ALB family. In addition, the inventors 
purified AFM from the serum-free conditioned medium of 
CHO D" cells transfected with the cDNA for AFM,- thus 
allowing the study of AFM in the absence of ApoAl . 

Based on the above, the present invention 

30 provides purified and isolated polynucleotides (e.g., 
DNA sequences and RNA transcripts thereof) encoding a 
novel human polypeptide, "AFM" as well as complexes of 
AFM with ApoAl and/or lipids, and polypeptide variants 
(including fragments and analogs) thereof which display 

35 one or more biological activities or properties specific 
to AFM. 



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Preferred DNA sequences of the invention 
include genomic and cDNA sequences as well as wholly or 
partially chemically and or enzymatically synthesized 
DNA sequences and biological replicas thereof. Also 
5 provided are autonomously replicating recombinant 
constructions such as plasmid and viral DNA vectors 
incorporating such sequences and especially vectors, 
wherein DNA encoding AFM or an AFM variant are 
operatively linked to an endogenous or exogenous 

10 expression control DNA sequence. 

According to another aspect of the invention, 
host cells, especially unicellular host cells such as 
prokaryotic and eukaryotic cells, are stably transformed 
with DNA sequences of the invention in a manner allowing 

15 AFM and variants thereof to be expressed therein. 

Host cells of the invention are useful in 
methods for the large scale production of AFM and AFM 
variants wherein the cells are grown in a suitable 
culture medium and the desired polypeptide products are 

20 isolated from the cells or from the growth medium. 

Novel AFM and AFM variant products of the 
invention may be obtained as isolates from natural cell 
sources, but are preferably produced by recombinant 
procedures involving host cells of the invention. The 

25 products may be obtained in fully or partially 

glycosylated, partially or wholly deglycosylated, or 
non-glycosylated forms, depending on the host cell 
selected for recombinant production and/or post- 
isolation processing. The products may also be bound to 

30 other molecules, such as cellularly derived lipids 
and/or ApoAl . 

Products of the invention include monomeric 
and multimeric polypeptides having the sequence of amino 
acid residues numbered -21 through 578 as set out in 

35 FIG. 1 herein. As explained in detail infra f this 

sequence includes a putative signal or leader sequence 



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which precedes the "mature" protein sequence and spans 
residue -21 (Met) through residue -1 (Thr) followed by 
the mature protein spanning residues 1 (Leu) to residue 
578 (Asn) . Based on amino acid composition, the 
5 calculated molecular weight of the mature protein 
lacking glycosylation or other post-translational 
modification is approximately 66,576 daltons. 

AFM variants of. the invention may comprise 
fragments including one or more of the regions specified 

10 herein and may also comprise polypeptide analogs wherein 
one or more of the specified amino acids is deleted or 
replaced: (1) without substantial loss, and preferably 
with enhancement, of one or more biological activities 
or immunological characteristics specific for AFM; or 

15 (2) with specific modulation of a particular 

ligand/receptor binding function. Analog polypeptides 
including additional amino acid residues (e.g., lysine) 
that facilitate multimer formation are also 
contemplated. 

20 Further comprehended by the present invention 

are antibodies (e.g., monoclonal and polyclonal . 
antibodies, single chain antibodies, chimeric 
antibodies, CDR-grafted antibodies and the like) or 
other binding proteins which are specific for AFM or AFM 

25 variants. Antibodies can be developed using isolated 
natural or recombinant AFM or AFM variants. 

The antibodies are useful in complexes for 
immunization as well as for purifying polypeptides of 
the invention. The antibodies are also useful in 

30 modulating (i.e., blocking, inhibiting or stimulating) 
ligand/receptor binding reactions involving AFM. 

Anti-idiotypic antibodies specific for anti- 
AFM antibodies and uses of such anti-idiotypic 
antibodies in treatment are also contemplated. Assays 

35 for the detection and quantification of AFM on cell 
surfaces and in fluids such as serum may involve a 



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single antibody or multiple antibodies in a "sandwich" 
assay format. 

The uses of the DNA and amino acid sequences 
of the present invention are varied. For example, 
5 knowledge of the sequence of a cDNA for AFM makes 
possible the isolation by DNA/ DNA hybridization of 
genomic DNA sequences encoding AFM and specifying -AFM 
expression control regulatory sequences such as 
promoters, operators and the like. DNA/DNA 

10 hybridization procedures carried out -with DNA sequences 
of the invention and under stringent conditions are 
likewise expected to allow the isolation of DNAs 
encoding allelic variants of AFM, other structurally 
related proteins sharing the biological and/or 

15 immunological specificity of AFM, and proteins 

homologous to AFM from non-human species (especially 
from other mammals) . DNAs of the invention are useful 
in DNA/KNA hybridization assays to detect the capacity 
of cells to synthesize AFM. A variety of specific uses 

20 for AFM are disclosed herein below. These uses are 
primarily based on the- known uses of the homologous 
albumin type polypeptides discussed above. 

Also made available by the invention are anti- 
sense polynucleotides (e.g., DNA and RNA) relevant to 

25 regulating expression of AFM by those cells which 

ordinarily express it. Furthermore, knowledge of the 
DNA and amino acid sequences of AFM make possible the 
generation by recombinant means of hybrid fusion 
proteins characterized by the presence of AFM protein 

30 sequences and immunoglobulin heavy chain constant 
regions and/or hinge regions . See, Capon, et al., 
Nature, 337: 525-531 (1989); Ashkenazi, et al., P.N.A.S. 
(USA), 88: 10535-10539 (1991); and PCT WO 89/02922, 
published April 6, 1989. 

35 



i 
t 



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BRIEF DESCRIPTION OF THE FIGURES 

Numerous other aspects and advantages of the 
present invention will therefore be apparent upon 
5 consideration of the following detailed description 
thereof, reference being made to the drawings wherein: 

FIG. 1 shows the nucleotide and deduced amino 
acid sequence of AFM. The putative signal sequence is 
indicated in lower case letters. Asterisks indicate 
10 putative sites for N-glycosylation . These are also 
represented as SEQ ID NO:l AND SEQ ID NO: 2. 

FIG. 2A and 2B show a comparison of ALB family 
amino acid sequences. FIG. 2A shows the alignment of ALB 
family proteins. Sequences were aligned using the 
15 Clustal method in the MegAlign program (DNASTAR) . 
Identical amino acid residues are boxed. Consensus 
indicates residues identical in all 4 sequences. 
Majority indicates 2 or 3 residues identical in all 4 
sequences. FIG. 2B shows percent similarity (right of 
20 diagonal) and identity (left of diagonal) between ALB 
family members. Similarities were determined using the 
GCG GAP program. The sequences for the comparison 
proteins are also provided as follows: serum albumin, 
SEQ ID NO: 3; alpha fetoprotein, SEQ ID NO: 4; and vitamin 
25 D binding protein, SEQ ID NO: 5. 

FIG. 3 shows the conserved Cys pattern in ALB 
family proteins. The mature form of ALB family proteins 
are depicted with thin vertical bars representing single 
Cys residues and thick vertical lines representing -Cys- 
30 Cys- sequences. 

FIG. 4 shows the putative disulfide bonding 
pattern for AFM. The organization of domains and double 
loops are drawn as originally proposed for ALB. 



35 



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FIG. 5 shows the expression of rAFM in stably 
transfected CHO D" cells. Samples were applied to SDS- 
PAGE under reducing conditions followed by 
5 electrophoretic transfer to nitrocelluose . After 

blocking with skim milk, the membrane was probed with 
the AM339 antibody followed by incubation with donkey 
rabbit anti-Ig. Immunoreactive proteins were visualized 
by chemiluminescence . Lane 1, 80 ml conditioned medium 

10 (CM) from CHO D~ cells transfected with AFM cDNA; lane 
2 f 80 ml CM from nontransf ected CHO D~ cells; lane 3, 
100 ng AFM purified from human plasma. Size markers (in 
kDa) are indicated on the left. 

FIG. 6 shows purification of rAFM. Samples 

15 purified from CHO D" cells transfected with AFM cDNA 
were adjusted with an equal volume of 2X sample buffer 
(125 mM Tris-HCl, pH 6.8, 4% SDS, 0.,005% bromophenol 
blue, 10% glycerol) and analyzed by SDS-PAGE using 4-20% 
polyacrylamide gradient gels (Novex) under reducing 

20 conditions. The gel was stained with Coomassie Brilliant 
Blue. Lanes 1 and 6 r 10 mg Mark-12 molecular weight 
markers (Novex, Inc.); lane 2, 50 mg total protein after 
addition of ammonium sulfate to concentrated CM 
(supernatant was dialyzed against PBS and subsequently 

25 loaded onto the gel) ; lane 3, 25 mg Phenyl Sepharose 
water eluate; lane 4, 10 mg Q Sepharose-purif ied rAFM; 
lane 5, 1 mg of Superdex 200-purified rAFM. 

30 DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS 

Definition of AFM 

AFM is defined as a polypeptide having a 
qualitative biological activity or property in common 
35 with AFM of FIG. 1. 



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Included within the scope of AFM as that term 
is used herein is the AFM having the amino acid sequence 
of AFM as set forth in FIG. 1, SEQ ID NO: 2; 
glycosylated, deglycosylated or unglycosylated 
5 derivatives of AFM; and lipidated or delipidated forms 
of AFM. 

Also included within the scope 1 of AFM are AFMs 
from any species , including without limitation: human, 
mouse, rat, pig, rabbit, monkey, dog, etc. Especially 
10 preferred is the human form of AFM. 

Variants of AFM 

Variants of AFM include homologous amino acid 
sequence variants of the sequence of FIG. 1, and 

15 homologous in-vitro-generated variants and derivatives 
of AFM, which are capable of exhibiting a biological 
activity or property in common with AFM of FIG. 1. 

"Homologous" is used herein to refer to the 
residues in a candidate sequence that are identical with 

20 the residues in the sequence of AFM in FIG. 1 after 
aligning the sequences • and introducing gaps, if 
necessary, to achieve the maximum percent homology. 

A biological activity or property of AFM is 
defined as either 1) immunological cross-reactivity with 

25 at least one epitope of AFM, or 2) the possession of at 
least one regulatory or effector function qualitatively 
in common with AFM. Examples of those activities may be 
found in the section herein describing uses of AFM. 

"Immunologically cross-reactive" as used 

30 herein means that the candidate polypeptide is capable 
of competitively inhibiting the qualitative biological 
activity of AFM or an AFM variant having this activity 
with polyclonal antisera raised against the known active 
analog. Such antisera are prepared in conventional 

35 fashion by injecting animals such as goats or rabbits, 

for example, subcutaneously with the known active analog 



WO 95/27059 X PCT/US95/04075 



in complete Freund's adjuvant, followed by booster 
intraperitoneal or subcutaneous injection in incomplete 
Freund's adjuvant. An example of production of 
polyclonal antisera production is presented in the 
5 examples section below. 

Amino acid sequence variants of AFM are 
prepared with various objectives in mind, including 
increasing the affinity of AFM for its binding partner, 
facilitating the stability, purification and preparation 

10 of AFM, and the like. 

Amino acid sequence variants of AFM fall into 
one or more of three classes: insertional, 
substitutional, or deletional variants. These variants 
ordinarily are prepared by site specific mutagenesis of 

15 nucleotides in the DNA encoding AFM, by which DNA 
encoding the variant is obtained, and thereafter 
expressing the DNA in recombinant cell culture. 
However, variant AFM fragments having up to about 100- 
150 amino acid residues are prepared conveniently by in 

20 vitro synthesis. 

The amino acid sequence variants of AFM are 
predetermined variants not found in nature or naturally 
occurring alleles. AFM variants typically exhibit the 
same qualitative biological activity as the naturally 

25 occurring AFM molecule. However, AFM variants and 
derivatives that are not capable of binding to their 
ligands are useful nonetheless (a) as a reagent- in 
diagnostic assays for AFM or antibodies to AFM, • (b) when 
insolubilized in accordance with known methods, as 

30 agents for purifying anti-AFM antibodies from antisera 

or hybridoma culture supernatant s, and (c) as immunogens 
for raising antibodies to AFM or as immunoassay kit 
components (labeled, as a competitive reagent for the 
native AFM or unlabeled as a standard for AFM assay) so 

35 long as at least one AFM epitope remains active. 



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While the site for introducing an amino acid 
sequence variation is predetermined, the mutation per se 
need not be predetermined. For example, in order to 
optimize the performance of a mutation at a given site, 
5 random or saturation mutagenesis (where all 20 possible 
residues are inserted) is conducted at the target codon 
and the expressed AFM variant is screened for the - 
optimal combination of desired activities. Such 
screening is within the ordinary skill in the art. 

10 Amino acid insertions usually will generally 

be on the order of about from 1 to 10 amino acid 
residues; substitutions are typically introduced for 
single residues; and deletions will generally range 
about from 1 to 30 residues. Deletions or insertions 

15 preferably are made in adjacent pairs, i.e. a deletion 
of 2 residues or insertion of 2 residues. It will be 
amply apparent from the following discussion that 
substitutions, deletions, insertions or any combination 
thereof are introduced or combined to arrive at a final 

20 construct. 

Insertional amino acid sequence variants of 
AFM are those in which one or more amino acid residues 
extraneous to AFM are introduced into a predetermined 
site in the target AFM and which displace the 

25 preexisting residues . Commonly, insertional variants 

are fusions of heterologous proteins or polypeptides to 
the amino or carboxyl terminus of AFM. Such variants 
are referred to as fusions of AFM and a polypeptide 
containing a sequence which is other than that which is 

30 normally found in AFM at the inserted position. Several 
groups of fusions are- contemplated herein. 

Immunologically active AFM derivatives and 
fusions comprise AFM and a polypeptide containing a non- 
AFM epitope, and are within the scope of this invention. 

35 The non-AFM epitope is any immunologically competent 

polypeptide, i.e., any polypeptide which is capable of 



WO 95/27059 ^° PCT/US95/04075 



eliciting an immune response in the animal to which the 
fusion is to be administered or which is capable of 
being bound by an antibody raised against the non-AFM 
polypeptide. Typical non-AFM epitopes will be those 
5 which are borne by allergens, autoimmune epitopes, or 
other potent immunogens or antigens recognized by pre- 
existing antibodies in the fusion recipient, including 
bacterial polypeptides such as trpLE, beta- 
galactosidase, viral polypeptides such as herpes gD 

10 protein, and the like. 

Immunogenic fusions are produced by cross- 
linking in vitro or by recombinant cell culture 
transformed with DNA encoding an immunogenic 
polypeptide. It is preferable that the immunogenic 

15 fusion be one in which the immunogenic sequence is 

joined to or inserted into AFM or fragment thereof by a 
peptide bond(s) . These products therefore consist of a 
linear polypeptide chain containing AFM epitope and at 
least one epitope foreign to AFM. It will be understood 

20 that it is within the scope of this invention to 

introduce the epitopes- anywhere within the AFM molecule 
or fragment thereof. 

Such fusions are conveniently made in 
recombinant host cells or by the use of bifunctional 

25 cross-linking agents. The use of a cross-linking agent 
to fuse AFM to the immunogenic polypeptide is not as 
desirable as a linear fusion because the cross-linked 
products are not as easily synthesized in structurally 
homogeneous form. 

30 These immunogenic insertions are particularly 

useful when formulated into a pharmacologically 
acceptable carrier and administered to a subject in 
order to raise antibodies against AFM, which antibodies 
in turn are useful in diagnostics or in purification of 

35 AFM by immunoaf f inity techniques known per se . In 

diagnostic applications, the antibodies will typically 



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be bound to or associated with a detectable group, 
examples of which are well known to those skilled in the 
art. Immunoaf f inity techniques could be used, for 
example, to purify AFM. 
5 Other fusions, which may or may not also be 

immunologically active, include fusions of the mature 
AFM sequence with a signal sequence heterologous to AFM, 
and fusions of AFM to polypeptides having enhanced 
plasma half life (ordinarily > about 20 hours) such as 

10 immunoglobulin chains or fragments thereof. 

Signal sequence fusions are employed in order 
to more expeditiously direct the secretion of AFM. The 
heterologous signal replaces the native AFM signal, and 
when the resulting fusion is recognized, i.e. processed 

15 and cleaved by the host cell, AFM is secreted. Signals 
are selected based on the intended host cell, and may 
include bacterial yeast, mammalian and viral sequences. 
The native AFM signal or the herpes gD glycoprotein 
signal is suitable for use in mammalian expression 

20 systems. 

Substantial variants are those in which at 
least one residue in the FIG. 2 sequence has been 
removed and a different residue inserted in its place. 
Such substitutions generally are made in accordance with 
25 the following Table 1 when it is desired to finely 
modulate the characteristics of AFM. 



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TABLE 1 

Original Residue Exemplary Substitutions 



Ala 


Ser 




Arg 


Lys 




Asn 


Gin; 


His 


Asp 


Glu 




Cys 


Ser; 


Ala 


Gin 


Asn 




Glu 


Asp 




Gly 


Pro 




His 


Asn; 


Gin 


lie 


Leu; 


Val 


Lieu 


116 , 


val 


Lys 


Arg; 


Gin; 


Met 


Leu; 


He 


Phe 


Met; 


Leu; 


Ser 


Thr 




Thr 


Ser 




Trp 


Tyr 




Tyr 


Trp; 


Phe 


Val 


lie; 


Leu 



Substantial changes in function or 
immunological identity are made by selecting 
substitutions that are less conservative than those in 
5 Table 1, i.e., selecting residues that differ more 
significantly in their effect on maintaining (a) the 
structure of the polypeptide backbone in the area of the 
substitution, for example as a sheet or helical 
conformation, (b) the charge or hydrophobic it y of the 
10 molecule at the target site or (c) the bulk of the side 
chain. The substitutions which in general are expected 
to produce the greatest changes in AFM properties will 



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be those in which (a) a hydrophilic residue,, e.g. seryl 
or threonyl, is substituted for (or by) a hydrophobic 
residue, e.g. leucyl, isoleucyl, phenylalanyl, valyl or 
alanyl; (b) a cysteine or proline is substituted for (or 
5 by) any other residue; (c) a residue having an 

electropositive side chain, e.g., lysyl, arginyl, or 
histidyl, is substituted for (or by) ah electronegative 
residue, e.g., glutamyl or aspartyl; or (d) a residue 
having a bulky side chain, e.g., phenylalanine, is 

10 substituted for (or by) one not having a side chain, 
e.g. glycine. 

Some deletions, insertions, and substitutions 
will not produce radical changes in the characteristics 
of AFM molecule. However, when it is difficult to 

15 predict the exact effect of the substitution, deletion, 
or insertion in advance of doing so, for example when 
modifying the AFM extracellular domain or an immune 
epitope, one skilled in the art will appreciate that the 
effect will be evaluated by routine screening assays. 

20 Another class of AFM variants are deletional 

variants. Deletions are characterized by the removal of 
one or more amino acid residues from AFM sequence. 
Deletions from the AFM C-terminal or the N-terminal, 
which preserve the biological activity or immune cross- 

25 reactivity of AFM are suitable. 

Deletions of cysteine or other labile residues 
also may be desirable, for example in increasing the 
oxidative stability of AFM. Deletion or substitutions 
of potential proteolysis sites, e.g. Arg-Arg, is 

30 accomplished by deleting one of the basic residues or 
substituting one by glutaminyl or histidyl residues. 

Preferably, the variants represent 
conservative substitutions. It will be understood that 
some variants may exhibit reduced or absent biological 

35 activity. These variants nonetheless are useful as 



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standards in immunoassays for AFM so long as they retain 
at least one immune epitope of AFM, 

Glycosylation variants are included within the 
scope of AFM. They include variants completely lacking 
5 in glycosylation (nonglycosylated) and variants having 
at least one less glycosylated site than the native form 
(deglycosylated) as well as variants in which the • 
glycosylation has been changed. Additionally , 
unglycosylated AFM which has the amino acid sequence of 

10 the native AFM is produced in recombinant prokaryotic 
cell culture because prokaryotes are incapable of 
introducing glycosylation into polypeptides . 

Glycosylation variants are produced by 
selecting appropriate host cells or by in vitro methods. 

15 Yeast , for example, introduce glycosylation which varies 
significantly from that of mammalian systems. 
Similarly, mammalian cells having a different species 
(e.g. hamster, murine, insect, porcine, bovine or ovine) 
or tissue origin (e.g. lung, lymphoid, mesenchymal or 

20 epidermal) than the source of AFM are routinely screened 
for the ability to introduce variant glycosylation as 
characterized for example by elevated levels of mannose 
or variant ratios of mannose, fucose, sialic acid, and 
other sugars typically found in mammalian glycoproteins . 

25 In vitro processing of AFM typically is accomplished by 
enzymatic hydrolysis, e.g. neuraminidase digestion. 

AFM isolated from natural sources or produced 
recombinantly will generally contain bound lipids. The 
nature of the bound lipids is expected to depend on the 

30 source of the AFM. Delipidated versions of AFM may be 
prepared by standard delipidation methods known in the 
art, especially the art relating to ALB where 
delipidation is a common procedure. One preferred 
method involves extracting an aqueous solution of AFM 

35 with a solvent capable of dissolving lipids, such as 1- 



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butanol or diisopropyl ether. Example 8 presents a 
specific exemplary method for delipidation . 

Certain post-translational derivatizations are 
the result of the action of recombinant host cells on 
5 the expressed polypeptide. Glutaminyl and asparaginyl 
residues are frequently post-translationally deamidated 
to the corresponding glutamyl and aspartyl residues. 
Alternatively, these residues are deamidated under 
mildly acidic conditions. Either form of these residues 

10 falls within the scope of this invention. 

Other post-translational modifications include 
hydroxylation of proline and lysine, phosphorylation of 
hydroxyl groups of seryl or threonyl residues, 
methylation of the a-amino groups of lysine, arginine, 

15 and histidine side chains (T ♦ E. Creighton, Proteins: 
Structure and Molecular Properties, (W. H. Freeman & 
Co.), San Francisco: 79-86 (1983), acetylation of the 
N-terminal amine and, in some instances, amidation of 
the C-terminal carboxyl. 

20 

Oligonucleotides relating to AFM 

DNA encoding AFM is synthesized by in vitro 
methods or is obtained readily from human liver cDNA 
libraries. The means for synthetic creation of the DNA 

25 encoding AFM, either by hand or with an automated 

apparatus, are generally known to one of ordinary skill 
in the art, particularly in light of the teachings 
contained herein. As examples of the state of the art 
relating to polynucleotide synthesis, one is directed to 

30 Maniatis et al., Molecular Cloning-A Laboratory Manual , 
Cold Spring Harbor Laboratory (1984) , and Horvath et 
al., An Automated DNA Synthesizer Employing 
Deoxynucleoside 3 '-Phosphoramidites, Methods in 
Enzymology 154: 313-326 (1987). 

35 Alternatively, to obtain DNA encoding AFM from 

sources other than murine or human, since the entire DNA 



WO 95/27059 ^ PCT/US95/04075 



sequence for the preferred embodiment of AFM is given , 
one needs only to conduct hybridization screening with 
labelled DNA encoding AFM or fragments thereof (usually, 
greater than about 20 , and ordinarily about 50bp) in 
5 order to detect clones T which contain homologous 

sequences in the cDNA libraries derived from the liver 
of the particular animal, followed by analyzing the 
clones by restriction enzyme analysis and nucleic acid 
sequencing to identify full-length clones. ' If full 

10 length clones are not present in the library, then 

appropriate fragments are recovered from the various 
clones and ligated at restriction sites common to the 
fragments to assemble a full-length clone. DNA encoding 
AFM from other animal species is obtained by probing 

15 libraries from such species with the human sequences, or 
by synthesizing the genes in vitro. 

Included within the scope hereof are nucleic 
acid sequences that hybridize under stringent conditions 
to a fragment of the DNA sequence in FIG. 1, which 

20 fragment is greater than about 10 bp, preferably 20-50 
bp, and even greater than 100 bp. Also included within 
the scope hereof are nucleic acid sequences that 
hybridize under stringent conditions to a fragment of 
AFM. "Stringent" is used to refer to conditions that 

25 are commonly understood in the art as stringent. An 

exemplary set of conditions include a temperature of 60 
- 70°C, (preferably about 65°C) and a salt concentration 
of 0.70M to 0.80M (preferably about 0.75M). 

Included also within the scope hereof are 

30 nucleic acid probes which are capable of hybridizing 

under stringent conditions to the cDNA of AFM or to the 
genomic gene for AFM (including introns and 5 1 or 3 1 
flanking regions extending to the adjacent genes or 
about 5,000 bp,, whichever is greater). 

35 



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Recombinant Expression of AFM 

In general , prokaryotes are used for cloning 
of DNA sequences in constructing the vectors useful in 
the invention. For example, E. coli K12 strain 2 94 
5 (ATCC No. 3144 6) is particularly useful. Other 

microbial strains which may be used include E. coli B 
and E coli X1776 (ATCC No. 31537) . Alternatively,' in 
vitro methods of cloning, e.g. polymerase chain 
reaction, are suitable. 

10 AFMs of this invention are expressed directly 

in recombinant cell culture as an N-terrninal methionyl 
analog, or as a fusion with a polypeptide heterologous 
to AFM, preferably a signal sequence or other 
polypeptide having a specific cleavage site at the N- 

15 terminus of AFM. For host prokaryotes that do not 
process AFM signal, the signal is substituted by a 
prokaryotic signal selected for example., from the group 
of the alkaline phosphatase, penicillinase, or heat 
stable enterotoxin II leaders. For yeast secretion the 

20 human AFM signal may be substituted by the yeast 

invertase, alpha factor or acid phosphatase leaders. In 
mammalian cell expression the native signal is 
satisfactory for mammalian AFM, although other mammalian 
secretory protein signals are suitable, as are viral 

25 secretory leaders, for example the herpes simplex gD 
signal . 

AFM may be expressed in any host cell-, but 
preferably are synthesized in mammalian hosts. However, 
host cells from prokaryotes, fungi, yeast, insects and 

30 the like are also are used for expression. Exemplary 

prokaryotes are the strains suitable for cloning as well 
as E. coli W3110 (F-, 1-, prototrophic, ATTC No. 7325), 
other enterobacteriaceae such as Serratia marescans, 
bacilli and various pseudomonads . Preferably the host 

35 cell should secrete minimal amounts of proteolytic 
enzymes . 



WO 95/27059 ° X PCT/US95/04075 



Expression hosts typically are transformed 
with DNA encoding AFM which has been ligated into an 
expression vector. Such vectors ordinarily carry a 
replication site (although this is not necessary where 
5 chromosomal integration will occur) . Expression vectors 
also include marker sequences which are capable of 
providing phenotypic selection in transformed cells, as 
will be discussed further below. Expression vectors 
also optimally will contain sequences which are useful 

10 for the control of transcription and translation, e.g., 
promoters and Shine-Dalgarno sequences (for prokaryotes) 
or promoters and enhancers (for mammalian cells) . The 
promoters may be, but need not be, inducible.. 

Promoters suitable for use with prokaryotic 

15 hosts illustratively include the B-lactamase and lactose 
promoter systems (Chang et al., Nature, 275, 615 (1978); 
and Goeddel et al., Mature 281, 544 (1979)), alkaline 
phosphatase, the tryptophan (trp) promoter system 
(Goeddel, Nucleic Acids Res. 8: 4057 (1980) and EPO 

20 Appln. Publ. No. 36,776) and hybrid promoters such as 
the tac promoter (H. de Boer et al., Proc. Natl. Acad. 
Sci. USA 80, 21-25 (1983)). However, other functional 
bacterial promoters are suitable. Their nucleotide 
sequences are generally known, thereby enabling 1 a 

25 skilled worker operably to ligate them to DNA encoding 
AFM (Siebenlist et al., Cell 20, 269 (1980)) using 
linkers or adapters to supply any required restriction 
sites. Promoters for use in bacterial systems also will 
contain a Shine-Dalgarno (S.D.) sequence operably linked 

30 to the DNA encoding AFM. 

In addition* to prokaryotes, eukaryotic 
microbes such as yeast or filamentous fungi are 
satisfactory. Saccharomyces cerevisiae is the most 
commonly used eukaryotic microorganism, although a 

35 number of other strains are commonly available. 



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Suitable promoting sequences for use with 
yeast hosts include the promoters for 3-phosphoglycerate 
kinase (Hitzeman et al., J. Biol. Chem. 255, 2073 
(1980)) or other glycolytic enzymes (Hess et al., 
5 J. Adv. Enzyme Reg. 7: 149 (1968); and Holland, 
Biochemistry 11, 4900 (1978)), such as enolase, 
glyceraldehyde-3-phosphate dehydrogenase, hexokinase, 
pyruvate decarboxylase phosphof ructokinase, glucose-6- 
phosphate isomerase, 3-phosphoglycerate mutase, pyruvate 

10 kinase, triosephosphate isomerase, phosphoglucose 
isomerase, and glucokinase. 

Other yeast promoters, which are inducible 
promoters having the additional advantage of . 
transcription controlled by growth conditions, are the 

15 promoter regions for alcohol dehydrogenase 2, 

isocytochrome C, acid phosphatase, degradative enzymes 
associated with nitrogen metabolism, metallothionein, 
glyceraldehyde 3-phosphate dehydrogenase, and enzymes 
responsible for maltose and galactose utilization. 

20 Suitable vectors and promoters for use in yeast 

expression are further described in R. Hitzeman et al., 
European Patent Publication No. 73,657A. 

Expression control sequences are known for 
eukaryotes. Virtually all eukaryotic genes have an AT- 

25 rich region located approximately 25 to 30 bases 

upstream from the site where transcription is initiated. 
Another sequence found 70 to 80 bases upstream from the 
start of transcription of many genes is a CXCAAT region 
where X may be any nucleotide. At the 3 f end of most 

30 eukaryotic genes is an AATAAA sequence which may be the 
signal for addition of the poly A tail to the 3 1 end of 
the coding sequence. All of these sequences are 
inserted into mammalian expression vectors. 

Suitable promoters for controlling 

35 transcription from vectors in mammalian host cells are 
readily obtained from various sources, for example, the 



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-33- 



PCT/US95/04075 



genomes of viruses such as polyoma virus. SV40, 
adenovirus, MMV (steroid inducible), retroviruses (e.g. 
the LTR of HIV) , hepatitis-B virus and most preferably 
cytomegalovirus, or from heterologous mammalian 
5 promoters, e.g. the beta act in promoter. The early and 
late promoters of SV40 are conveniently obtained as an 
SV40 restriction fragment which also contains the SV40 
viral origin of replication. Fiers et al., Nature 273, 
113 (1978) . The immediate early promoter of the human 
10 cytomegalovirus is conveniently obtained as a Hindlll E 
restriction fragment. Greenaway, P. J. et al., Gene 18, 
355-360 (1982) . 

Transcription of a DNA encoding AFM by higher 
eukaryotes is increased by inserting an enhancer 
15 sequence into the vector. Enhancers are cis-acting 

elements of DNA, usually about from 10-300 bp, that act 
on a promoter to increase its transcription. Enhancers 
are relatively orientation and position independent 
having been found 5 f (Laimins, L. et al., PNAS 78, 993 
20 (1981)) and 3' (Lusky, M. L., et al., Afol. Cell Bio. 3, 
1108 (1983) to the transcription unit, within an intron 
(Banerji, J. L. et al., Cell 33: 729 (1983)) as well as 
within the coding sequence itself (Osborne, T. F . , 
et al., Afol. Cell Bio. 4, 1293 (1984)). Many enhancer 
25 sequences are now known from mammalian genes (globin, 
elastase, albumin, a-f etoprotein and insulin) . 
Typically, however, one will use an enhancer from a 
eukaryotic cell virus. Examples include the SV40 
enhancer on the late side, of the replication origin (bp 
30 100-270) , the cytomegalovirus early promoter enhancer, 
the polyoma enhancer' on the late side of the replication 
origin, and adenovirus enhancers. 

Expression vectors used in eukaryotic host 
cells (yeast, fungi, insect, plant, animal, human or 
35 nucleated cells from other multicellular organisms) will 
also contain sequences necessary for the termination of 



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PCT/US95/04075 



transcription which may affect mRNA expression. These 
regions are transcribed as polyadenylated segments in 
the untranslated portion of the mRNA encoding AFM. The 
3' untranslated regions also include transcription 
5 termination sites . 

Expression vectors may contain a selection 
gene, also termed a selectable marker. Examples of 
suitable selectable markers for mammalian cells are 
dihydrofolate reductase (DHFR) , thymidine kinase (TK) or 
10 neomycin. 

Suitable eukaryotic host cells for expressing 
AFM include monkey kidney CV1 line transformed by SV40 
(COS-7, ATCC CRL 1651) ; human embryonic kidney line (293 
or 293 cells subcloned for growth in suspension culture, 

15 Graham, F. L. et al., J. Gen Virol, 36: 59 (1977)); baby 
hamster kidney cells (BHK, ATCC CCL 10) ; Chinese hamster 
ovary-cells-DHFR (CHO, Urlaub and Chasin, PNAS (USA) 77, 
4216, (1980)); mouse Sertoli cells (TM4, Mather, J, P., 
Biol. Reprod. 23, 243-251 (1980)); monkey kidney cells 

20 (CV1 ATCC CCL 70); African green monkey kidney cells 
(VERO-76 , ATCC CRL-1587) ; human cervical carcinoma 
cells (HELA, ATCC CCL 2); canine kidney cells (MDCK, 
ATCC CCL 34); buffalo rat liver cells (BRL 3A, ATCC CRL 
1442); human lung cells (W138, ATCC CCL 75); human liver 

25 cells (Hep G2, HB 8065); mouse mammary tumor (MMT 

060562, ATCC CCL51) ; and, TRI cells (Mather, J. P. et 
al., Annals N.Y. Acad. Sci. 383, 44-68 (1982)). 

Construction of suitable vectors containing 
the desired coding and control sequences employ standard 

30 ligation techniques. Isolated plasmids or DNA fragments 
are cleaved, tailored,* and. religated in the form desired 
to form the plasmids required. 

Host cells are transformed with the expression 
vectors of this invention and cultured in conventional 

35 nutrient media modified as appropriate for inducing 
promoters, selecting transf ormants or amplifying AFM 



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gene. The culture conditions, such as temperature, pH 
and the like, are those previously used with the host 
cell selected for expression, and will be apparent to 
the ordinarily skilled artisan. 
5 The host cells referred to in this disclosure 

encompass cells in in vitro culture as well as cells 
which are within a host animal. 

"Transformation" means introducing DNA into an 
organism so that the DNA is replicable, either as an 

10 extrachromosomal element or by chromosomal integration. 
The method used herein for transformation of the host 
cells may be, for example, the method of Graham, F. and 
van der Eb, A., Virology 52, 456-457 (1973). However, 
other methods for introducing DNA into cells such as by 

15 nuclear injection or by protoplast fusion may also be 
used. If prokaryotic cells or cells which contain 
substantial cell wall constructions are used, the 
preferred method of transfection is calcium treatment 
using calcium chloride as described by Cohen, F . N. 

20 et al., Proc. Natl. Acad. Sci. (USA) 69, 2110 (1972). 

"Transfection" refers to the introduction of 
DNA into a host cell whether or not any coding sequences 
are ultimately expressed. Numerous methods of 
transfection are known to the ordinarily skilled 

25 artisan, for example, CaP04 and electroporation . 
Transformation of the host cell is indicative of 
successful transfection. 

Recovery and Purification of AFM 

30 AFM is recovered and purified from recombinant 

cell cultures by known methods, including ammonium 
sulfate or ethanol precipitation, acid extraction, anion 
or cation exchange chromatography, phosphocellulose 
chromatography, immunoaf f inity chromatography, 

35 hydroxyapatite chromatography, lectin chromatography, 
hydrophobic interaction chromatography, and gel 



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filtration chromatography. Other known purification 
methods within the scope of this invention utilize, for 
example, immobilized carbohydrates, epidermal growth 
factor, or complement domains. Moreover, reverse-phase 
5 HPLC and chromatography using anti-AFM antibodies are 
useful for the purification of AFM. AFM may preferably 
be purified in the presence of a protease inhibitor such 
as PMSF. A specific preferred method of purifying AFM 
is found in Example 1. 

10 

Uses of AFM 

As mentioned above, in view of the homology 
between AFM and each of ALB, AFP and VDB, it is expected 
that AFM and variants thereof will have identical or 

15 similar biological activities and utilities. In general, 
members of the albumin family show a high propensity to 
bind and transport a wide variety of substances through 
the body including fatty acids, hormones, enzymes, dyes, 
trace metals and drugs. It is expected that a 

20 preparation of AFM which has its endogenous lipids 

removed could be used to reduce high concentrations of 
free fatty acids (hyperlipidemia) found in disease 
states such as acute pancreatitis, ARDS, sepsis and 
atherosclerosis . 

25 Similar to proposed functions for ALB, AFM can 

also potentially be used as an antioxidant. AFM is 
expected to act as an antioxidant by sequestering metal 
ions and preventing those ions from accelerating- free- 
radical reactions (ie. decomposition of lipid peroxides 

30 to peroxy and alkoxy radicals; formation of hydroxyl 
radical from hydrogen peroxide) or AFM may act to 
directly inactivate hydrogen peroxide, hydroxyl radicals 
and hypochlorous acid. The detoxification of oxygen 
metabolites by AFM can limit the detrimental effects 

35 that unbound oxygen metabolites have in inactivating 
beneficial anti-proteases (ai-antiproteinase and a x - 



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antitrypsin) and in damaging DNA, proteins and lipids. 
Thus, AFM may be used to ameliorate ischaemia- 
reperfusion injury, rheumatoid arthritis, ARDS, 
cardiopulmunary bypass, sepsis and any other diseases or 
5 tissue damage caused by an excess production of oxygen 
metabolites from leukocytes and/or arachidonic acid 
metabolism. 

Another use of AFM is based on the finding 
that albumin family proteins bind and detoxify a wide 

10 variety of toxic products including man-made drugs . 
Thus, AFM can ameliorate the effects of toxic plasma 
substances released as a result of inflammation and can 
be conjugated to toxic pharmaceuticals so as to minimize 
detrimental activities of the drug. 

15 AFM may also have anticoagulant properties as 

has been reported for ALB. AFM may inhibit platelet 
aggregation and thus could be a useful additive to 
resuscitation fluids in disease states characterized by 
increased platelet aggregation such as sepsis, 

20 hemmorrhagic shock and burn injury. 

Serum AFM levels may increase or decrease due 
to a particular pathological condition as has been 
observed with AFP. Thus, calculation of serum AFM levels 
using antibodies described in Example 11 will be useful 

25 in diagnosing specific human diseases. 

Administ ration of AFM 

For administration in vivo, AFM is placed into 

sterile, isotonic formulations, and administered by 
30 standard means well known in the field. The formulation 

of AFM is preferably liquid, and is ordinarily a 

physiologic salt solution containing 0.5-10 mM calcium, 

non-phosphate buffer at pH 6.8-7.6, or may be 

lyophilized powder. 
35 It is envisioned that intravenous delivery, or 

delivery through catheter or other surgical tubing will 



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be the primary route for therapeutic administration. 
Alternative routes include tablets and the like, 
commercially available nebulizers for liquid 
formulations, and inhalation of lyophilized or 
5 aerosolized receptors. Liquid formulations may be 

utilized after reconstitution from powder formulations. 

AFM may also be administered via microspheres, 
liposomes, other microparticulate delivery systems or 
sustained release formulations placed in certain tissues 

10 including blood. 

The dose of AFM administered will be dependent 
upon the properties of AFM employed, e.g. its activity 
and biological half-life, the concentration of AFM in 
the formulation, the administration route for AFM, the 

15 site and rate of dosage, the clinical tolerance of the 
patient involved, the pathological condition afflicting 
the patient and the like, as is well within the skill of 
the physician; 

AFM may also be administered along with other 

20 pharmacologic agents such as antibiotics, anti- 
inflammatory agents, and anti-tumor agents. It may also 
be useful to administer AFM along with other therapeutic 
proteins such as gamma-interf eron and other 
immunomodulators . 

25 

T.iaands of AFM 

It is also posible that the AFM of the present 
invention will have an additional natural ligand or 
ligands (other than the lipids discussed herein) and 

30 that such ligands will be capable of modulating the 

biological activities* of AFM in vivo. One of ordinary 
skill may be able to utilize the teachings of the 
present invention to screen for ligands of the AFMs 
disclosed herein and then isolate and purify them, e.g., 

35 by immunochromatography using AFM or a variant of AFM 
bound to a solid support. 



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Antibodies to AFM 

Also included within the scope of the 
invention are antibodies (e.g., monoclonal and 
5 polyclonal antibodies, single chain antibodies, chimeric 
antibodies, CDR-grafted antibodies and the like) or 
other binding proteins which are specific Ifor AFM or its 
variants. Antibodies can be developed using natural or 
recombinant AFM or AFM variants or cells expressing such 

10 molecules on their surfaces . Active fragments of such 
antibodies are also contemplated. 

The antibodies are useful for purifying the 
polypeptides described herein, or identifying and 
purifying cells producing the polypeptides on their 

15 surfaces. The antibodies could also be used to modulate 
(e.g., block, inhibit or stimulate) ligand binding to 
AFM. Anti-idiotypic antibodies are also contemplated. 
Assays for detection and quantitation of AFM on cell 
surfaces and in fluids (such as serum, blood, 

20 cerebrospinal fluid, urine, semen, milk, and tears) may 
involve a single antibody or a "sandwich" assay format. 



* * * 

25 It is understood that the application of the 

teachings of the present invention to a specific problem 
or situation will be within the capabilities of one 
having ordinary skill in the art in light of the ■ 
teachings contained herein. Examples of the products of 

30 the present invention and representative processes for 

their isolation, use, and manufacture appear below. All 
literature and patent citations herein are expressly 
incorporated by reference. 



35 



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EXAMPLES 

example 1: Lipopolvsaccharide (LPS) Neutralization Assay 

5 A. Formation of ELPS . 

Sheep erythrocytes are first coated with S. 
minnesota Re595 LPS (List Biological) as previously 
described (J. Ex. Med. 170:1231) . The concentration of 
LPS used to coat erythrocytes is 10 mg/8 x 10 7 
10 erythrocytes. After coating with LPS, erythrocytes are 
resuspended in 5 mM veronal buffer, .pH 7.5, containing 
150 mM NaCl, 0.1% gelatin and 1 mM EDTA (EDTAGVB 2 ~) to a 
concentration of 1x10 s cells/ml. 

15 B. Opsonization of ELPS. 

ELPS are opsonized using normal human plasma (NHP) 
as a source of opsonizing proteins (septin) (J. Ex. Med. 
176:719) or LBP (J. Ex. Med. 170:1231). NHP is diluted 
1:100 in phosphate buffered saline without divalent 

20 cations containing 1 mM EDTA (PDEDTA) and then mixed 1:1 
with ELPS (1 x 10 8 cells /ml) . The mixture is then 
incubated 10 minutes at 37°C, spun down for 1 minute at 
800x g in a swinging bucket centrifuge. Cells are 
washed 2x with EDTAGVE 2 " and resuspended to a final 

25 concentration of 1 x 10 8 cells/ml in EDTAGVB 2 ~. 

Erythrocytes treated as above are denoted E-septins. 

C. Assay of Samples for LPS Neutralizing Activity. 

The following step measures the ability of a given 
30 sample to reduce the amount of binding of LPS coated 

erythrocytes to macrophages in a CD-14 dependent manner. 

Dilutions of samples to be tested are made in 
PDEDTA. E-septins are incubated 1:1 with sample 
dilutions at 37°C for 4 0 minutes. One sample is 
35 included in which E-septin is incubated with PDEDTA 

alone as a control. Following incubation, E-septins are 



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spun down in a swinging bucket centrifuge at 800x g for 
1 minute and resuspended in EDTAGVB 2 " to a concentration 
of 1 x 10 8 cells/ml. E-septins treated in this manner 
are denoted E-septin 1 . Five ml of the resuspended E- 
5 sept ins 1 are added to a macrophage monolayer (see below) 
in a 60 well terasaki plate (NUNC, Inc.) . The plate is 
incubated 20 minutes at room temperature followed by 
inversion and incubation another 12 minutes at room 
temperature to separate unbound E-septins 1 from the 

10 macrophages. The plate is then dipped in a beaker of 
cold PBS with no divalent cations containing 0.001% 
azide to wash off unbound erythrocytes. Binding of E- 
septins 1 is evaluated by phase contrast microscopy. 
Binding is expressed as the attachment index which 

15 denotes the number of erythrocytes bound per 100 

macrophages. LPS neutralizing activity of the samples 
is evaluated by comparing the binding of E-septins 1 
incubated with dilutions of the sample in PDEDTA to E- 
septin 1 incubated with PDEDTA alone. Activity is 

20 measured in units/ml. This represents the dilution at 

which the sample reduces E-septin 1 binding by 50%- in the 
standard assay. 

D. Macrophage Monolayer. 

25 Monocyte derived macrophages are obtained by 

culturing human monocytes in teflon beakers as described 
(J. Ex. Med. 156:1149). On the day of the assay, 
macrophages are removed from the beaker, washed with PBS 
containing divalent cations (PBS 2 + ) and resuspended in 

30 PBS 2 + containing 0.5 mg/ml human serum albumin (Armour 
Pharm.), 0.3 U/ml aprotinin (Sigma) and 3 mM glucose 
(HAP buffer) to 1 x 10 6 cells/ml. Thirty minutes prior 
to addition of E-septins 1 to the terasaki plate, 
macrophage monolayers are formed by adding 5 ml of cells 

35 and 5 ml of HAP buffer to each well. Immediately prior 



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to addition of E-septins 1 , the plate is flooded with 
PDEDTA and the wells are lightly aspirated. 

F.YAMPT.K ?: Purification of AFM 
5 All steps , except where noted were done at 

controlled room temperature. All buffers were made with 
pyrogen free water and sterile filtered prior to use. 
One unit of fresh frozen plasma (FFP) was thawed by 
immersion of the packet in a room-temperature water 

10 bath. The thawed plasma was first transferred to a 

graduated cylinder, the volume noted, and then poured 
into a beaker. The FFP was then stirred magnetically 
while the beaker was immersed in a ice-water bath. To 
the FFP/ sufficient 3 . 9M ammonium sulfate (4°C) was 

15 slowly added to achieve a final ammonium sulfate 

concentration of 1.6M. This mixture was allowed to stir 
at 4°C for an additional 4 hours. The mixture was then 
centrifuged at 10,000 x g for 60 minutes. The 
supernatant was recovered and allowed to come to room 

20 temperature by immersion in a room temperature water 
bath. 

A portion (250 ml) of the ammonium sulfate 
supernatant was loaded onto a 2.6 x 10cm Phenyl 
Sepharose HP column previously equilibrated with' 50mM 

25 sodium phosphate, 1.6M ammonium sulfate; pH 7.5. 

Loading, wash and elution steps were done at a linear 
flow rate of 40cm/hr. Following sample loading the 
column was washed in turn with 50mM sodium phosphate, 
1.6M ammonium sulfate; pH 7.5 and 50mM sodium phosphate; 

30 pH 7.5. Elution of activity (see Example 1) was 

accomplished by the introduction of water. The pH of 
the water eluate was adjusted to 8.2 with 0.1M Tris base 
and loaded, at a flow rate of 150cm/hr, onto a 2.6 x 
10cm Q Sepharose HP column previously equilibrated with 

35 20mM Tris-HCl; pH 8.2. Following sample loading the 
column was thoroughly washed with first 20mM Tris-HCl; 



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pH 8.2 and then 0.1M sodium chloride, 20mM Tris-HCl; pH 
8.2. The column was then resolved with a 0.33mM/ml 
linear gradient of sodium chloride ranging from 0 . 1 to 
0.3M, followed by a 7mM/ml linear gradient of sodium 
5 chloride ranging from 0.3M to 1.0M in 20mM Tris-HCl; pH 
8.2. Active fractions were pooled (30 ml). 

One third of the pooled activity from above 
was loaded onto a Superdex 200 prep column (2.6 x 60cm) 
previously equilibrated with phosphate buffered saline; 

10 pH 7.4. The column was loaded and resolved at a flow 
rate of lml/min. The fractions were analyzed for 
activity and by reducing SDS-PAGE. A pool (8mi) of the 
appropriate fractions showed two major protein bands by 
reducing SDS PAGE at a molecular weight of 87 kd and 28 

15 kd. Two milliliters of the above pool was submitted for 
sequence analysis. The 28 kd protein had the same N- 
terminus as ApoAl and the 87 kd protein had a novel N- 
terminus (see below) . The remaining 6ml of the Superdex 
200 prep pool was loaded onto a Superdex 200 prep 

20 column (2. 6 x 60cm) previously equilibrated with 1% 

sodium deoxycholate, 0.15M sodium chloride, 50mM Tris- 
HCl; pH 8.5. The column was loaded and resolved at a 
flow rate of lml/min. The fractions were analyzed by 
SDS-PAGE. Those fractions corresponding to either the 

25 87 kd or the 28 kd proteins were separately pooled (16ml 
each) . 

Four milliliters of each pool was diafiltered 
against 50mM Tris-HCl; pH 8.5 to remove excess sodium 
deoxycholate and concentrated to approximately O.lmg/ml. 



30 



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EXAMPLE 3: Amino Acid Sequence Analysis of N-terminus 

and Proteolytic Fragments of Purified AFM 

To obtain the N-terminal sequence , 10 ug of 
purified AFM was loaded on the reverse phase portion of 
5 a precycled biphasic sequencing column. The column was 
loaded on a Hewlett Packard G1004A protein sequencer 
with on-line phenylthiohydantoin amino acid analysis 
performed with a Hewlett Packard 1090 high performance 
liquid chromatography (HPLC) . The N-terminal amino acid 
10 sequence obtained from the protein was : 

LPTQPRDIENFXSTQKFIEDNIEYITIIAFAQYVQ (SEQ ID NO: 6) , 

where "X" represents an unassignable amino acid. 

15 To obtain sequences from AFM tryptic peptide 

fragments, 100 mg of AFM was dissolved in 8M urea with 
0.4 M ammonium bicarbonate, then reduced with DTT and 
carboxymethylated with iodoacetic acid. The sample was 
subsequently diluted with water to adjust the urea 

20 concentration to 2M, then digested with sequencing grade 
trypsin (Boehringer Mannheim) at 37°C for 18 h with an 
enzyme to substrate ratio of 1:50. The digested protein 
was injected on a Hewlett Packard 1090 HPLC equipped 
with a 4.6 x 250 mm C18 reverse phase column (Vydac) . 

25 Elution was performed using a linear gradient of 

acetonitrile with 0.1 % trif luoroacetic acid at a flow 
rate of 0.75 ml/min. Elution was monitored at 214 nm and 
fractions were collected. Selected fractions were run on 
the Hewlett Packard G1004A protein sequencer as 

30 described above. The amino acid sequences obtained from 
select tryptic fragments are summarized in Table 1. 



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Table 1: Trypgip fragments 

FX18 YHYLIR (SEQ ID NO: 7) 

5 FX20 FTFEYSR (SEQ ID NO: 8) 

FX27 F TD SENVCQERD ADP (SEQ ID NO: 9) 



10 



FX29 IVQIYKDLLR (SEQ ID NO: 10) 

FX32 IAPQLSTEELVSLGE (SEQ ID NO: 11) 



FX37 RHPDLSIPELLR (SEQ ID NO: 12) 

15 FX45 ESLLNHFLYEVAR (SEQ ID NO: 13) 

FX53 RNP F VF AP TLLT VAVHFEE VAKS C C (SEQ ID NO: 14) 



20 EXAMPLE 4: Isolation of AFM cDNA 

The polymerase chain reaction (PCR) was used 
to amplify a portion of the AFM gene from which an exact 
probe could be derived. A PCR (PCR 1) was first 
performed with fully degenerate primers specifying the 

25 sense strand for the N-terminal amino acid sequence 

QKFIEDN (SEQ ID NO: 15) [5 f ACG CTG AAT TCG CCA (GA)AA 
(GA)TT (CT)AT (ATC)GA (GA)GA (CT)AA] (SEQ ID NO:' 16) and 
the antisense strand for a portion of the FX 29 tryptic 
peptide sequence IVQIYKD (SEQ ID NO: 17) [5 1 ACG CTA 

30 AGC TTG C(GA)T C(CT)T T (GA) T A (GAT) A T (CT) T G (AGCT) A 

C (GAT) A T] (SEQ ID NO:" 18) . One ng of Quick Clone Human 
liver cDNA (Clontech, cat. no. 7113-1) was used as the 
template in a 100 ml PCR performed in a standard buffer 
(Perkin-Elmer Cetus) with 1 mM of each degenerate 

35 primer. The cycling parameters used in the PCR were as 
follows: 95°C , 8 min (1 cycle); 94°C, 1 min, 34°C, 10 



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min, 72°C, 2 min (3 cycles); 94°C, 1 min f 50°C, 1 min, 
72°C, 2 min (45 cycles); 72°C, 5 min (1 cycle). 

Agarose gel analysis of PCR 1 did not reveal 
the amplification of any specific products, thus we 
5 utilized an aliquot of PCR 1 as a template for a second 
PCR (PCR 2) using a nested primer pair. For this 
. experiment, we used fully degenerate primers specifying 
the sense strand for the N-terminal amino acid sequence 
DNIEYIT (SEQ ID NO: 19) [5* ACG CTG AAT TCG CGA (CT)AA 

10 (CT)AT (ATC)GA (GA)TA (CT)AT (ATC)AC] (SEQ ID NO: 20) 
and the antisense strand for the FX 20 tryptic peptide 
sequence FTFEYS (SEQ ID NO: 21) [5 f ACG CTA AGC TTG 
C(GATC)G A (GA) T A(CT)T C(GA)A A (ACGT) G T (GA) A A] (SEQ ID 
NO: 22) . PCR 2 was then performed using the same 

15 reaction mix and cycling parameters as PCR 1, except for 
the substitution of 1 ml of PCR 1 in place of the human 
liver cDNA. Analysis of PCR 2 by agarose gel 
electrophoresis revealed the amplification of a 1 kb 
product . 

20 To prepare PCR 2 for DNA sequencing, the 

inventors utilized the EcoR I and Hind III sites that 
were incorporated into the degenerate primers. These 
sites were used to clone the fragment into mpl9 
(Boehringer Mannheim) . The 1 kb PCR 2 product cloned in 

25 mp!9 (mpl9 AFM) was then sequenced in its entirety from 
both strands. Nucleotide sequence analysis of the 
fragment confirmed that we had amplified a segment of 
AFM cDNA as the sequence was found to have an open 
reading frame which encoded 3 tryptic peptides that were 

30 already sequenced (Table 1, Fxs 27, 45, 53) . The 

nucleotide sequence of the 1 kb fragment was compared to 
all sequences in the Genbank database and found to be 
unique. We also observed that the partial AFM cDNA had 
significant homology with cDNAs reported for ALB family 

35 proteins (ALB, AFP and VDB) . Therefore, in order to to 
isolate a full-length cDNA encoding AFM and to minimize 



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the probability of hybridizing other ALB family genes , 
we screened a human liver cDNA library with an exact 
18mer oligonucleotide (5 1 TAT GTG CTA TGG AGG GGC) (SEQ 
ID NO: 23) derived from a segment of ATM sequence that 
5 was not highly homologous to ALB, AFP and VDB . The 
oligonucleotide was end-labeled with 32 Pi and used to 
screen a human liver cDNA library (Clontech, cat. no. 
HLlllSa) . Positive clones were purified and rescreened 
with the same oligonucleotide probe. A single positive 

10 clone (17AFM) with a 2.3 kb insert was chosen for 

further study and phage DNA was prepared. The 2.3 kb 
insert was then sequenced in its entirety from both 
strands and verified to encode AFM. 

This approach enabled the inventors to isolate 

15 a lambda phage (17AFM) containing full-length AFM cDNA. 

EXAMPLE 5 : Characterization of AFM 

The insert in 17AFM is 2287 bp (FIG. 1) 
consisting of a 317 bp 5' untranslated region, a 1797 bp 

20 sequence encoding a protein of 599 amino acids and a 173 
bp 3 1 untranslated region. The predicted amino acid 
sequence of AFM was found to contain all the tryptic 
peptides (See Table 1) that had been previously 
sequenced from the purified protein. Translation of the 

25 AFM cDNA sequence reveals that a 21 amino acid 

hydrophobic leader peptide precedes the experimentally 
determined N-terminus of mature AFM. The mature AFM is 
predicted to have 578 amino acids with a calculated Mr 
of 66576 and pi of 5.65. The difference between the 

30 calculated Mr of AFM and its apparent molecular weight 
on SDS-PAGE is likely -due to glycosylation . AFM has 4 
potential sites for N-glycosylation (FIG. 1) and N- 
glycanase treatment reduced the apparent Mr of AFM to 
65000 when analyzed by reducing SDS-PAGE (data not 

35 shown) . 



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A comparison of the deduced AFM. amino acid 
sequence and other ALB family sequences is shown in FIG. 
2 . It is evident there is strong similarity between AFM 
and other ALB family members throughout the entire 
5 protein. When conserved amino acids are taken into 

account , the of AFM to AFP, ALB and VDB is 60.4%, 54.8% 
and 41.2% respectively. The distribution of Cys residues 
is conserved among ALB family members . The positions of 
AFM Cys residues are clearly consistent with this 

10 arrangement (FIG. 3) . The Cys residues in ALB family 
proteins have also been proposed to form a pattern of 
disulfide bridges enabling these proteins to be depicted 
as a series of 9 double loops defining 3 structural 
domains. FIG. 4 shows that the 34 Cys residues in AFM 

15 can be arranged into a pattern of 17 disulf ide-linked 

pairs that parallels the domain organization observed in 
other ALB family proteins. 

EXAMPLE 6: Chromosomal Mapping 

20 PCR was performed on a panel of somatic cell 

hybrids (Bios Laboratories, cat. no. CP2-02) to identify 
the chromosomal location of the gene. For PCR, we 
utilized primers (5' CAA CCC TGC TGT GGA CCA C; 5' GCA 
CAT ATG TTT TAT CAG CTT T) (SEQ ID NO: 24 and SEQ ID NO: 

25 25) that would be expected to amplify an 88 bp fragment 
between nt 17 90 and 1878 in the AFM cDNA. Each PCR on 
somatic cell hybrid DNA was performed in a standard 100 
ml reaction mixture (Perkin-Elmer Cetus) containing 250 
ng DNA and a final concentration of 0.1 mM of each 

30 primer. The cycling parameters were as follows: 95°C, 5 
min (1 cycle); 94°C, 1 min, 56°C, 1 min, 72°C, 1 min (25 
cycles); 72°C, 5 min (1 cycle). 

Utilizing PCR on a panel of commercially 
available somatic cell hybrids (data not shown) , we 

35 detected an amplified product in only 2 hybrids. Both of 
these hybrids had DNA in common from human chromosomes 



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4, 5 and 8. Since PCRs performed on hybrids containing 
DNA from chromosomes 5 and 8 did not yield amplified 
products, we conclude that AFM resides on human 
chromosome 4 along with other ALB family genes. 

5 

example 7; stable Expression of rAFM 

Two separate PCR f s were performed on AFM- cDNA 
to generate 2 overlapping fragments that span the entire 
AFM cDNA sequence. The oligonucleotide pair (5' TCA CCT 

10 CTA GAC CAC CAT GAA ACT ACT AAA ACT TAC AG + 5 1 AAT TTC 
TCA GGA GAT CTT TGT ATA) (SEQ ID NO: 26 and SEQ ID NO: 
27) used in the first PCR introduced an Xba I site and a 
perfect Kozak sequence preceeding the AFM initiator 
codon. The amplified product was subsequently cloned 

15 into pGEMT (Promega) to create pD Jll . The 

oligonucleotide pair (5 f AAA TAT ACA AAG ATC TCC TGA GAA 
+ 5' TCC CGG TCG ACT CAG TTG CCA ATT TTT GGA C) (SEQ ID 
NO: 28 and SEQ ID NO: 29) used in the second PCR 
introduced a Sal I site following the natural stop codon 

20 in AFM and the product was cloned into pGEMT to create 
pDJ13. The 3 f end of AFM was then joined to the 5' end 
by ligating a Bgl II-Sal I fragment from pDJ13 into 
pDJll that had been digested with Bgl II and Sal I. The 
resultant plasmid (pDJ14) was then digested with Xba I 

25 and Sal I and the entire AFM cDNA was cloned into the 
mammalian expression vector pDSRa (European Patent 
Application A20398753) that was modified to include 
unique Xba I and Sal I sites. The AFM expression vector 
was used to transfect a Chinese Hamster Ovary (CHO) cell 

30 line deficient in dihydrof olate reductase (CHO D~) . 
Transf ectants were selected in medium lacking 
hypoxanthine and thymidine. An RNase protection assay 
was used to screen for transf ectants that had AFM- 
specific mRNA. A single clone was grown without serum as 

35 described (See, Bourdrel, L. et al., Protein Expression 



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Purif. 4: 130 (1993) to generate conditioned medium (CM) 
containing rAFM. 

A single stable trans fectant expressing high 
levels of AFM-specific mRNA was isolated. Immunoblots 
5 performed with AM339 (see Example 12) demonstrates that 
this antibody recognizes both rAFM produced from the 
transf ectant as well as natural AFM isolated from human 
plasma (FIG. 5) . rAFM was purified from CM derived from 
this transf ectant (FIG. 6) and SDS-PAGE demonstrated 
10 rAFM to be greater than 95% pure with the same N- 

terminus as AFM purified from plasma (data not shown) . 

EXAMPLE 8: Protein Purification 

Serum-free CM was concentrated 10-fold and 

15 diafiltered against 25 mM sodium phosphate, pH 7.5 using 
a Filtron ultrafiltration apparatus loaded with 10 K 
molecular weight cut-off filters. The CM was then 
adjusted with 3 . 9 M ammonium sulfate to achieve a final 
ammonium sulfate concentration of 1.6 M. This mixture 

20 was stirred for 0.5 hr; no precipitate was observed. The 
solution was then filtered in succession through 0.45mm 
and 0.22mm filters. The resultant filtrate was loaded 
onto a Phenyl Sepharose HP column previously 
equilibrated with 50 mM sodium phosphate, 1.6 M" ammonium 

25 sulfate; pH 7.5. Loading, washing and elution were done 
at a linear flow rate of 40 cm/hr . Following sample 
loading, the column was washed successively with 50 mM 
sodium phosphate, 1.6 M ammonium sulfate, pH 7.5- and 50 
mM sodium phosphate, pH 7.5. rAFM was eluted with water 

30 and detected by immunoblotting (see below) . 

The pH of the water eluate was adjusted to 8.0 
with 0.1 M Tris-base and loaded at a flow rate of 100 
cm/hr onto a Q Sepharose HP column previously 
equilibrated with 20 mM Tris-HCl, pH 8.0. Following 

35 sample loading, the column was thoroughly washed with 20 
mM Tris-HCl, pH 8.2, then with 0.1 M NaCl, 20 mM Tris- 



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HC1, pH 8.2. The column was then resolved with a 3 
column volume (CV) linear gradient of NaCl ranging from 
0 - 0.3 M, followed by a 1 CV linear gradient of NaCl 
ranging from 0.3 M to 1.0 M in 20 mM Tris-HCl, pH 8.0. 
5 Fractions containing rAFM were pooled and loaded onto a 
Superdex 200 column previously equilibrated with 
phosphate-buffered saline pH 7.4. The column was loaded 
and resolved at a flow rate of 1 ml/min . 

10 EXAMPLE 9: Delioidation of AFM 

To one volume of protein solution was added 
2.5 volumes of 1-butano/diisopropyl ether (40:60). The 
mixture was shaken gently for 30 minutes at room 
temperature and then centrifuged for 5 minutes at 500 x 

15 g. The aqueous layer was recovered and to this was 
added a second 2.5 volumes of 1-butanol/diisopropyl 
ether (40:60) . The sample was treated as before and the 
aqueous phase recovered. To the twice extracted aqueous 
phase was added one volume of diisopropyl ether, the 

20 mixture shaken and immediately centrifuged at 250 x g 

for 5 minutes . The aqueous layer was recovered and used 
as essentially delipidated. 

EXAMPLE 10: Immunoblottincr 

25 All samples for immunoblotting were 

electrophoresed on 4-20% SDS polyacylamide gels (Novex) 
and the proteins were then electrophoretically • 
transferred to nitrocelluose membranes (Schleicher and 
Schuell, cat. no. BA83) . The filters were first treated 

30 with polyclonal antibody AM339 that was raised in 

rabbits against a synthetic peptide (DLSLREGKFTDSENVC) 
(SEQ ID NO: 30) derived from amino acids 304 - 319 in 
AFM and then with donkey anti-rabbit Ig linked to 
horseradish peroxidase. Immune complexes were visualized 

35 by enhanced chemiluminescence according to the 
manufacturer's (Amersham) specifications. 



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EXAMPLE 1 1; Nucleotide sequence comparisons 

Nucleotide sequences were compared to the 



Genbank (Release 78.0) sequences using the method of 
Pearson and Lipman (Proc. Natl. Acad. Sci. USA 84, 2444- 
5 2448 (1988)) in the FAST A program of the Genetics 

Computer Group (GCG) , Inc. (Madison, WI) . Comparisons 
are shown in FIG. 2A. 

EXAMPLE 12: Generation of pep tide antibodies specific 
10 f or 

Since AFM was similar to at least three other 
members of the albumin family, it was possible that 
antibodies generated against the entire protein would 
also cross react with other albumin family proteins . To 

15 create AFM-specific antibodies, we first identified 
specific peptides of AFM which were dissimilar to 
peptide sequences found in the other albumin family 
proteins . These peptide sequences were then synthesized 
and the synthetic peptides were used to inject rabbits 

20 to obtain polyclonal antisera against each peptide. The 
AFM peptides that were synthesized are as follows : 

HI EKLVKDMVEYKDRC (SEQ ID NO: 31) 



25 The corresponding antibody is referred to as AM384. 



aa 43-56 in AFM 



H2 



CIINSNKDDRPKDLSLR 



(SEQ ID NO: 32) 



aa 292-308 in AFM 



The 



corresponding antibody is referred to as AM 609. 



30 



H3 



DL S LREGKF TD SENVC • 



(SEQ ID NO: 30) 



aa 304-319 in AFM 



The 



corresponding antibody is referred to as AM 339. 



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H4 CQERDADPDTFFAKFT (SEQ ID NO: 33) 

aa 319-334 in AFM 
The corresponding antibody is referred to as AM 1104. 

5 EXAMPLE 1 3: Generation of polyclonal antisera to AFM 

Rabbit polyclonal antiserum was generated from 
purified AFM by methods that are standard in the art. 
The antiserum was found to bind specifically to AFM. 

10 Discussion of Examples 

ALB family proteins are comprised of three 
homologous folding domains and are predicted to have 
evolved from an ancestral gene that coded for an 
approximately 190 amino acid single domain protein 

15 containing 3 double loops formed by 6 disulfide bridges. 
The genes in this family have all been mapped to the 
4qll-q22 region of chromosome 4. AFM shares significant 
homology with ALB family proteins and has Cys residues 
consistent with a similar overall 3-domain organization. 

20 In addition, AFM has been localized to chromosome 4. 
Thus, there is compelling evidence that AFM is the 
fourth member of the ALB family. 

There are some noteworthy distinctions among 
ALB family members. Concentrations in adult serum are 50 

25 ng/ml for AFP, 350 mg/ml for VDB, 40 mg/ml for ALB and 
30 mg/ml for AFM (data obtained by immunoblot analysis) . 
ALB is not glycosylated, AFP and VDB each have 1 
potential N-gly cosy lat ion site while AFM has 4 potential 
sites. ALB expresses one free thiol group that has been 

30 implicated in complex formation with Cys, glutathione, 
mercurial and gold compounds. In contrast, AFP and VDB 
have an even number of Cys residues and are thought not 
to have a free thiol. AFM has an even number of Cys 
residues, suggesting that it may not have a free thiol 

35 and may not bind glutathione and mercurials as does ALB. 



WO 95/27059 ^ PCT/US95/04075 



There also are differences in the intradomain 
disulfide bonding pattern among ALB family members. VDB 
is predicted to have a disulfide bridge in double loop 
1A. This bridge is absent in ALB, AFP and AFM. A 
5 disulfide bridge domain 2C is common to ALB, VDB and AFM 
but is not present in AFP. Thus, while the 4 ALB family 
proteins are evolutionarily related, there are clear 
differences in the molecular organization of these 
proteins . 

10 Structural similarities between AFM and other 

ALB family members suggest that AFM could scavenge or 
transport a variety of ligands. We examined whether 
known ligand-binding sites in the sequence of ALB family 
proteins were also present in AFM. VDB has a binding 

15 site for sterols between amino acids 35-49 and a binding 
site for actin between amino acids 373-403. Using the 
GCG GAP program and the alignment of FIG. 2A, AFM has 
60% similarity and 40% identity between VDB amino acids 
35-4 9 but only 32% similarity and 10% identity between 

20 VDB amino acids 373-403. Thus, it is possible that AFM 
has sterol binding sites (e.g., the amino acids in AFM 
that correspond to amino acids 35 - 49 of VDB) but it is 
not likely to bind actin. The X-ray crystal structure 
of ALB was used to show that ALB binds a variety of 

25 ligands (aspirin, warfarin, IS, DIS, TIB, bilirubin) 

between amino acids 186-260 in domain 2 A and an array of 
ligands (aspirin, diazepam, digit oxin, clofibrate, 
ibuprofen, IS, DIS, TIB, long chain fatty acids) between 
amino acids 37 9-455 in domain 3A. A GCG GAP comparison 

30 between analogous regions in AFM reveals that AFM has 
54% similarity and 35% identity in domain 2A and 45% 
similarity and 25% identity in domain 3A. These 
moderate degrees of similarity make it possible but not 
conclusive as to whether AFM binds the same ligands as 

35 ALB in domains 2 A and 3A. 



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AfrfrrevietiQPS 

The abbreviations used in the above Examples 
5 are: AFM, afamin; AFP, a-f etoprotein; ALB, human serum 
albumin; CHO, Chinese Hamster Ovary; CM, conditioned 
medium; CV f column volume; DIS, 3, 5- diiodosalicyclic 
acid; DTT, dithiothreitol; HPLC, high performance liquid 
chromotography; IS, 5-iodosalicyclic acid; PAGE, 
10 polyacrylamide gel electrophoresis; PBS, phosphate- 
buffered saline; PCR, polymerase chain reaction; r, 
recombinant; TIB, 2,3,5- triioidobenzoic acid; VDP, 
vitamin D-binding protein. 



The invention now being fully described, it 
will be apparent to one of ordinary skill in the art 
that many changes and modifications can be made thereto, 
20 without departing from the spirit and scope of the 
invention as set forth herein. 



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SEQUENCE LISTING 



(1) GENERAL INFORMATION: 

(i) APPLICANT: AMGEN INC. 



(ii) TITLE OF INVENTION: Afamin: A Human Serum Albumin-Like * 
Protein 

(iii) NUMBER OF SEQUENCES: 33 

(iv) CORRESPONDENCE ADDRESS : 

(A) ADDRESSEE: Amgen Center, Patent Operations/RRC 

(B) STREET: 1840 DeHavilland Drive 

(C) CITY: Thousand Oaks 

(D) STATE: California 

(E) COUNTRY: U.S. 

(F) ZIP: 91320-1789 

(v) COMPUTER READABLE FORM: 

(A) MEDIUM TYPE: Floppy disk 

(B) COMPUTER: IBM PC compatible 

(C) OPERATING SYSTEM: PC-DOS /MS-DOS 

(D) SOFTWARE: Patentln Release #1.0, Version #1.25 

(vi) CURRENT APPLICATION DATA: 

(A) APPLICATION NUMBER: 

(B) FILING DATE: 

(C) CLASSIFICATION: 



(2) INFORMATION FOR SEQ ID NO:l: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 2287 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS : unknown 

(D) TOPOLOGY: unknown 

<ii) MOLECULE TYPE: cDNA 



(ix) FEATURE: 

(A) NAME /KEY: CDS 

(B) LOCATION: 318.. 2117 

(ix) FEATURE: 

(A) NAME/KEY: mat_peptide 

(B) LOCATION: 381. .2114 

(ix) FEATURE: 

(A) NAME/KEY: sig_peptide 

(B) LOCATION: 318.. 380 



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<xi) SEQUENCE DESCRIPTION: SEQ ID NO:l: 

CCCCGAGTCT CTGCGCCTTC ACATAGTTGT CACAGGACTA AAGCAAATTG ATCCAGGGGG 60 

AAACACTGTA GACCGTGTAT ATAAAAACAC TCTATAAACT GCAATGCTCA ATTCTTAGTA 120 

TAACTATTGT TGTTGTATTG ATATTTATTA GTATTGGTGC TCACAAAAAG AGTCTAAATT 180 

CCATAAGTCT TTATATTCAG GCTACTCTTT ATTTTTGAAA ACTCATTTTC TATCACCTTT 240 

TTCTATTTTA CTCCATATTG AGGCCTCATA AATCCAATTT TTTATTTCTT TCTTTTGTAA 300 

ATGTGGTTTC TACAAAG ATG AAA CTA CTA AAA CTT ACA GGT TTT ATT TTT 350 

Met Lys Leu Leu Lys Leu Thr Gly Phe lie Phe 
-21 -20 -15 

TTC TTG TTT TTT TTG ACT GAA TCC CTA ACC CTG CCC ACA CAA CCT CGG 398 
Phe Leu Phe Phe Leu Thr Glu Ser Leu Thr Leu Pro Thr Gin Pro Arg 
-10 -5 15 

GAT ATA GAG AAC TTC AAT AGT ACT CAA AAA TTT ATA GAA GAT AAT ATT 446 
Asp lie Glu Asn Phe Asn Ser Thr Gin Lys Phe lie Glu Asp Asn lie 
10 15 20 

GAA TAC ATC ACC ATC ATT GCA TTT GCT CAG TAT GTT CAG GAA GCA ACC 4 94 

Glu Tyr lie Thr lie lie Ala Phe Ala Gin Tyr Val Gin Glu Ala Thr 
25 30 35 

TTT GAA GAA ATG GAA AAG CTG GTG AAA GAC ATG GTA GAA TAC AAA GAC 542 . 

Phe Glu Glu Met Glu Lys Leu Val Lys Asp Met Val Glu Tyr Lys Asp 
40 - 45 50 

AGA TGT ATG GCT GAC AAG ACG CTC CCA GAG TGT TCA AAA TTA CCT AAT 590 
Arg Cys Met Ala Asp Lys Thr Leu Pro Glu Cys Ser Lys Leu Pro Asn 
55 60 65 70 

AAT GTT TTA CAG GAA AAA ATA TGT GCT ATG GAG GGG CTG CCA CAA AAG 638 
Asn Val Leu Gin Glu Lys He Cys Ala Met Glu Gly Leu Pro Gin Lys 
75 80 85 

CAT AAT TTC TCA CAC TGC TGC AGT AAG GTT GAT GCT CAA AGA AGA CTC 686 
His Asn Phe Ser His Cys Cys Ser Lys Val Asp Ala Gin Arg Arg Leu 
90 95 100 

TGT TTC TTC TAT AAC AAG AAA TCT GAT GTG GGA TTT CTG CCT CCT TTC 734 
Cys Phe Phe Tyr Asn Lys Lys Ser Asp Val Gly Phe Leu Pro Pro Phe 
105 ~ 110 115 

CCT ACC CTG GAT CCC GAA GAG AAA TGC CAG GCT TAT GAA AGT AAC AGA 7 82 

Pro Thr Leu Asp Pro Glu Glu Lys Cys Gin Ala Tyr Glu Ser Asn Arg 
120 ' 125 130 

GAA TCC CTT TTA AAT CAC TTT TTA TAT GAA GTT GCC AGA AGG AAC CCA 830 
Glu Ser Leu Leu Asn His Phe Leu Tyr Glu Val Ala Arg Arg Asn Pro 
135 140 145 150 

TTT GTC TTC GCC CCT ACA CTT CTA ACT' GTT GCT GTT CAT TTT GAG GAG 878 



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Phe Val Phe Ala Pro Thr Leu Leu Thr Val Ala Val His Phe Glu Glu 
155 160 165 

GTG GCC AAA TCA TGT TGT GAA GAA CAA AAC AAA GTC AAC TGC CTT CAA 926 
Val Ala Lys Ser Cys Cys Glu Glu Gin Asn Lys Val Asn Cys Leu Gin 
170 175 180 

ACA AGG GCA ATA CCT GTC ACA CAA TAT TTA AAA GCA TTT TCT TCT TAT 974 
Thr Arg Ala lie Pro Val Thr Gin Tyr Leu Lys Ala Phe Ser Ser Tyr 
185 190 195 

CAA AAA CAT GTC TGT GGG GCA CTT TTG AAA TTT GGA ACC AAA GTT GTA 1022 
Gin Lys His Val Cys Gly Ala Leu Leu Lys Phe Gly Thr Lys Val Val 
200 205 210 

CAC TTT ATA TAT ATT GCG ATA CTC AGT CAA AAA TTC CCC AAG ATT GAA 1070 
His Phe He Tyr He Ala He Leu Ser Gin Lys Phe Pro Lys He Glu 
215 220 225 230 

TTT AAG GAG CTT ATT TCT CTT GTA GAA GAT GTT TCT TCC AAC TAT GAT 1118 
Phe Lys Glu Leu He Ser Leu Val Glu Asp Val Ser Ser Asn Tyr Asp 
235 240 245 

GGA TGC TGT GAA GGG GAT GTT GTG CAG TGC ATC CGT GAC ACG AGC AAG 1166 
Gly Cys Cys Glu Gly Asp Val Val Gin Cys He Arg Asp Thr Ser Lys 
250 255 260 

GTT ATG AAC CAT ATT TGT TCA AAA CAA GAT TCT ATC TCC AGC AAA ATC 1214 
Val Met Asn His He Cys Ser Lys Gin Asp Ser He Ser Ser Lys He 
265 270 275 

AAA GAG TGC TGT GAA AAG AAA ATA CCA GAG CGC GGC CAG TGC ATA ATT 1262 
Lys Glu Cys Cys Glu Lys Lys He Pro Glu Arg Gly Gin Cys He lie 
280 285 290 

AAC TCA AAC AAA GAT GAT AGA CCA AAG GAT TTA TCT CTA AGA GAA GGA 1310 
Asn Ser Asn Lys Asp Asp Arg Pro Lys Asp Leu Ser Leu Arg Glu Gly 
295 300 305 " 310 

AAA TTT ACT GAC AGT GAA AAT GTG TGT CAA GAA CGA GAT GCT GAC CCA 1358 
Lys Phe Thr Asp Ser Glu Asn Val Cys Gin Glu Arg Asp Ala Asp Pro 
315 320 325 

GAC ACC TTC TTT GCG AAG TTT ACT TTT GAA TAC TCA AGG AGA CAT CCA 1406 
Asp Thr Phe Phe Ala Lys Phe Thr Phe Glu Tyr Ser Arg Arg His Pro. 
330 335 340 

GAC CTG TCT ATA CCA GAG CTT TTA AGA ATT GTT CAA ATA TAC AAA GAT 1454 
Asp Leu Ser He Pro Glu Leu Leu Arg He Val Gin He Tyr Lys Asp 
345 350 • " 355 

CTC CTG AGA AAT TGC TGC AAC ACA GAA AAC CCT CCA GGT TGT TAC CGT 1502 
Leu Leu Arg Asn Cys Cys Asn Thr Glu Asn Pro Pro Gly Cys Tyr Arg 
360 365 370 

TAC GCG GAA GAC AAA TTC AAT GAG ACA ACT GAG AAA AGC CTC AAG ATG 1550 
Tyr Ala Glu Asp Lys Phe Asn Glu Thr Thr Glu Lys Ser Leu Lys Met 
375 380 385 390 



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GTA CAA CAA GAA TGT AAA CAT TTC CAG AAT TTG GGG AAG GAT GGT TTG 1598 
Val Gin Gin Glu Cys Lys His Phe Gin Asn Leu Gly Lys Asp Gly Leu 
395 400 405 

AAA TAC CAT TAC CTC ATC AGG CTC ACG AAG ATA GCT CCC CAA CTC TCC 1646 
Lys Tyr His Tyr Leu lie Arg Leu Thr Lys lie Ala Pro Gin Leu Ser 
410 415 420 

ACT GAA GAA CTG GTG TCT CTT GGC GAG AAA ATG GTG ACA GCT TTC ACT 1694 
Thr Glu Glu Leu Val Ser Leu Gly Glu Lys Met Val Thr Ala Phe Thr 
425 430 435 

ACT TGC TGT ACG CTA AGT GAA GAG TTT GCC TGT GTT GAT AAT TTG GCA 1742 
Thr Cys Cys Thr Leu Ser Glu Glu Phe Ala Cys Val Asp Asn Leu Ala 
440 445 450 

GAT TTA GTT TTT GGA GAG TTA TGT GGA GTA AAT GAA AAT CGA ACT ATC 1790 
Asp Leu Val Phe Gly Glu Leu Cys Gly Val Asn Glu Asn Arg Thr lie 
455 460 465 470 

AAC CCT GCT GTG GAC CAC TGC TGT AAA ACA AAC TTT GCC TTC AGA AGG 1838 
Asn Pro Ala Val Asp His Cys Cys Lys Thr Asn Phe Ala Phe Arg Arg 
475 480 485 

CCC TGC TTT GAG AGT TTG AAA GCT GAT AAA ACA TAT GTG CCT CCA CCT 1886 
Pro Cys Phe Glu Ser Leu Lys Ala Asp Lys Thr Tyr Val Pro Pro Pro 
490 495 500 

TTC TCT CAA GAT TTA TTT ACC TTT CAC GCA GAC ATG TGT CAA TCT CAG 1934 . 

Phe Ser Gin Asp Leu Phe Thr Phe His Ala Asp Met Cys Gin Ser Gin 
505 510 515 

AAT GAG GAG CTT CAG AGG AAG ACA GAC AGG TTT CTT GTC AAC TTA GTG 1982 
Asn Glu Glu Leu Gin Arg Lys Thr Asp Arg Phe Leu Val Asn Leu Val 
520 525 530 

AAG CTG AAG CAT GAA CTC ACA GAT GAA GAG CTG CAG TCT TTG TTT ACA 2030 
Lys Leu Lys His Glu Leu Thr Asp Glu Glu Leu Gin Ser Leu Phe Thr 
535 540 5415 550 

AAT TTC GCA AAT GTA GTG GAT AAG TGC TGC AAA GCA GAG AGT CCT GAA 2078 
Asn Phe Ala Asn Val Val Asp Lys Cys Cys Lys Ala Glu Ser Pro Glu 
555 560 565 

GTC TGC TTT AAT GAA GAG AGT CCA AAA ATT GGC AAC TGAAGCCAGC ' 2124 

Val Cys Phe Asn Glu Glu Ser Pro Lys He Gly Asn 
570 575 

TGCTGGAGAT ATGTAAAGAA AAAAGCACCA AAGGGAAGGC TTCCTATCTG TGTGGTGATG 2184 

AATCGCATTT CCTGAGAACA AAATAAAAGG ATTTTTCTGT AACTGTCACC TGAAATAATA 2244 

CATTGCAGCA AGCAATAAAC ACAACATTTT GTAAAGTTAA AAA 2287 



(2) INFORMATION FOR SEQ ID NO:2: 



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(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 599 amino acids 

(B) TYPE: amino acid 
(D) TOPOLOGY: linear 

(ii) MOLECULE TYPE: protein 

(xi) SEQUENCE DESCRIPTION: SEQ ID NO:2: 



Met Lys Leu Leu Lys Leu Thr Gly Phe He Phe Phe Leu Phe Phe Leu 
-21 -20 " -15 -10 

Thr Glu Ser Leu Thr Leu Pro Thr Gin Pro Arg Asp He Glu Asn Phe 
-5 1 5 10 

Asn Ser Thr Gin Lys Phe He Glu Asp Asn He Glu Tyr He Thr He 
15 20 25 

He Ala Phe Ala Gin Tyr Val Gin Glu Ala Thr Phe Glu Glu Met . Glu 
30 35 40 

Lys Leu Val Lys Asp Met Val Glu Tyr Lys Asp Arg Cys Met Ala Asp 
45 50 55 

Lys Thr Leu Pro Glu Cys Ser Lys Leu Pro Asn Asn Val Leu Gin Glu 
60 65 70 75 

Lys He Cys Ala Met Glu Gly Leu Pro Gin Lys His Asn Phe Ser His 
80 B5 90 

Cys Cys Ser Lys Val Asp Ala Gin Arg Arg Leu Cys Phe Phe Tyr Asn 
95 100 105 

Lys Lys Ser Asp Val Gly Phe Leu Pro Pro Phe Pro Thr Leu Asp Pro 
110 115 120 

Glu Glu Lys Cys Gin Ala Tyr Glu Ser Asn Arg Glu Ser Leu Leu Asn 
125 130 135 

His Phe Leu Tyr Glu Val Ala Arg Arg Asn Pro Phe Val Phe Ala Pro 
140 145 150 155 

Thr Leu Leu Thr Val Ala Val His Phe Glu Glu Val Ala Lys Ser Cys 
160 165 170 

Cys Glu Glu Gin Asn Lys Val Asn Cys Leu Gin Thr Arg Ala He Pro 
175 180 185 

Val Thr Gin Tyr Leu Lys Ala Phe Ser Ser Tyr Gin Lys His Val Cys 
190 195 • 200 

Gly Ala Leu Leu Lys Phe Gly Thr Lys Val Val His Phe He Tyr He 
205 210 215 

Ala He Leu Ser Gin Lys Phe Pro Lys lie Glu Phe Lys Glu Leu He 
220 225 230 235 

Ser Leu Val Glu Asp Val Ser Ser Asn Tyr Asp Gly Cys Cys Glu Gly 



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240 245 250 

Asp Val Val Gin Cys lie Arg Asp Thr Ser Lys Val Met Asn His lie 
255 260 265 

Cys Ser Lys Gin Asp Ser lie Ser Ser Lys lie Lys Glu Cys Cys Glu 
270 275 280 

Lys Lys lie Pro Glu Arg Gly Gin Cys lie He Asn Ser Asn Lys Asp 
285 290 295 

Asp Arg Pro Lys Asp Leu Ser Leu Arg Glu Gly Lys Phe Thr Asp Ser 
300 305 310 315 

Glu Asn Val Cys Gin Glu Arg Asp Ala Asp Pro Asp Thr Phe Phe Ala 
320 325 330 

Lys Phe Thr Phe Glu Tyr Ser Arg Arg His Pro Asp Leu Ser He Pro 
335 340 345 

Glu Leu Leu Arg He Val Gin He Tyr Lys Asp Leu Leu Arg Asn Cys 
350 " 355 360 

Cys Asn Thr Glu Asn Pro Pro Gly Cys Tyr Arg Tyr Ala Glu Asp Lys 
365 370 375 

Phe Asn Glu Thr Thr Glu Lys Ser Leu Lys Met Val Gin Gin Glu Cys 
380 385 390 395 

Lys His Phe Gin Asn Leu Gly Lys Asp Gly Leu Lys Tyr His Tyr Leu 
400 405 410 

He Arg Leu Thr Lys He Ala Pro Gin Leu Ser Thr Glu Glu Leu Val 
415 420 425 

Ser Leu Gly Glu Lys Met Val Thr Ala Phe Thr Thr Cys Cys Thr Leu 
430 ^ 435 440 

Ser Glu Glu Phe Ala Cys Val Asp Asn Leu Ala Asp Leu Val Phe Gly 
445 450 455 

Glu Leu Cys Gly Val Asn Glu Asn Arg Thr He Asn Pro Ala Val Asp 
460 ^ 465 470 475 

His Cys Cys Lys Thr Asn Phe Ala Phe Arg Arg Pro Cys Phe Glu Ser. 

480 485 490 

Leu Lys Ala Asp Lys Thr Tyr Val Pro Pro Pro Phe Ser Gin Asp Leu 
495 500 505 

Phe Thr Phe His Ala Asp Met Cys Gin Ser Gin Asn Glu Glu Leu Gin 
510 515 520 

Arg Lys Thr Asp Arg Phe Leu Val Asn Leu Val Lys Leu Lys His Glu 
525 " ~ 530 535 

Leu Thr Asp Glu Glu Leu Gin Ser Leu Phe Thr Asn Phe Ala Asn Val 
540 545 550 555 



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Val Asp Lys Cys Cys Lys Ala Glu Ser Pro Glu Val Cys Phe Asn Glu 
560 565 570 

Glu Ser Pro Lys lie Gly Asn 
575 



(2) INFORMATION FOR SEQ ID NO: 3: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 60 9 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 
-(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: protein 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO:3: 

Met Lys Trp Val Thr Phe lie Ser Leu Leu Phe Leu Phe Ser Ser Ala 
1 5 10 15 

Tyr Ser Arg Gly Val Phe Arg Arg Asp Ala His Lys Ser Glu Val Ala 
20 25 30 

His Arg Phe Lys Asp Leu Gly Glu Glu Asn Phe Lys Ala Leu Val Leu 
35 ~ 40 45 

lie Ala Phe Ala Gin Tyr Leu Gin Gin Cys Pro Phe Glu Asp His Val 
50 55 60 

Lys Leu Val Asn Glu Val Thr Glu Phe Ala Lys Thr Cys Val Ala Asp 
65 70 75 80 

Glu Ser Ala Glu Asn Cys Asp Lys Ser Leu His Thr Leu Phe Gly Asp 
85 ' 90 95 

Lys Leu Cys Thr Val Ala Thr Leu Arg Glu Thr Tyr Gly Glu Met Ala 
100 105 110 

Asp Cys Cys Ala Lys Gin Glu Pro Glu Arg Asn Glu Cys Phe Leu Gin 
115 120 125 

His Lys Asp Asp Asn Pro Asn Leu Pro Arg Leu Val Arg Pro Glu Val 
130 135 140 

Asp Val Met Cys Thr Ala Phe -His Asp Asn Glu Glu Thr Phe Leu Lys 
145 150 155 160 

Lys Tyr Leu Tyr Glu lie Ala Arg Arg His Pro Tyr Phe Tyr Ala Pro 
165 170 175 

Glu Leu Leu Phe Phe Ala Lys Arg Tyr Lys Ala Ala Phe Thr Glu Cys 
180 185 190 



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Cys Gin Ala Ala Asp Lys Ala Ala Cys Leu Leu Pro Lys Leu Asp Glu 
195 200 205 

Leu Arg Asp Glu Gly Lys Ala Ser Ser Ala Lys Gin Arg Leu Lys Cys 
210 215 220 

Ala Ser Leu Gin Lys Phe Gly Glu Arg Ala Phe Lys Ala Trp Ala Val 
225 230 235 240 

Ala Arg Leu Ser Gin Arg Phe Pro Lys Ala Glu Phe Ala Glu Val Ser 
245 250 255 ' 

Lys Leu Val Thr Asp Leu Thr Lys Val His Thr Glu Cys Cys His Gly 
260 265 270 

Asp Leu Leu Glu Cys Ala Asp Asp Arg Ala Asp Leu Ala Lys Tyr lie 
275 280 285 

Cys Glu Asn Gin Asp Ser lie Ser Ser Lys Leu Lys Glu Cys Cys Glu 
290 295 300 

Lys Pro Leu Leu Glu Lys Ser His Cys lie Ala Glu Val Glu Asn Asp 
305 310 * 315 320 

Glu Met Pro Ala Asp Leu Pro Ser Leu Ala Ala Asp Phe Val Glu Ser 
325 330 335 

Lys Asp Val Cys Lys Asn Tyr Ala Glu Ala Lys Asp Val Phe Leu Gly 
340 345 350 

Met Phe Leu Tyr Glu Tyr Ala Arg Arg His Pro Asp Tyr Ser Val Val 
355 360 365 

Leu Leu Leu Arg Leu Ala Lys Thr Tyr Glu Thr Thr Leu Glu Lys Cys 
370 375 ~ 380 

Cys Ala Ala Ala Asp Pro His Glu Cys Tyr Ala Lys Val Phe Asp Glu 
385 390 395 400 

Phe Lys Pro Leu Val Glu Glu Pro Gin Asn Leu He Lys Gin Asn Cys 
405 410 415 

Glu Leu Phe Lys Gin Leu Gly Glu Tyr Lys Phe Gin Asn Ala Leu Leu 
420 425 430 

Val Arg Tyr Thr Lys Lys Val Pro Gin Val Ser Thr Pro Thr Leu Val 
435 440 445 

Glu Val Ser Arg Asn Leu Gly Lys Val Gly Ser Lys Cys Cys Lys His 
450 455- 460 

Pro Glu Ala Lys Arg Met Pro Cys Ala Glu Asp Tyr Leu Ser Val Val 
465 470 475 480 

Leu Asn Gin Leu Cys Val Leu His Glu Lys Thr Pro Val Ser Asp Arg 
485 490 495 

Val Thr Lys Cys Cys Thr Glu Ser Leu Val Asn Arg Arg Pro Cys Phe 



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— 04— 



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500 505 510 

Ser Ala Leu Glu Val Asp Glu Thr Tyr Val Pro Lys Glu Phe Asn Ala 
515 520 525 

Glu Thr Phe Thr Phe His Ala Asp lie Cys Thr Leu Ser Glu Lys Glu 
530 535 540 

Arg Gin lie Lys Lys Gin Thr Ala Leu Val Glu Leu Val Lys His Lys 
545 550 555 560 

Pro Lys Ala Thr Lys Glu Gin Leu Lys Ala Val Met Asp Asp Phe Ala 
565 570 575 

Ala Phe Val Glu Lys Cys Cys Lys Ala Asp Asp Lys Glu Thr Cys Phe 
580 585 590 

Ala Glu Glu Gly Lys Lys Leu Val Ala Ala Ser Gin Ala Ala Leu Gly 
595 600 605 

Leu 



(2) INFORMATION FOR SEQ ID NO: 4: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 609 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: protein 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 4: 

Met Lys Trp Val Glu Ser lie Phe Leu lie Phe Leu Leu Asn Phe Thr 
15 10 15 

Glu Ser Arg Thr Leu His Arg Asn Glu Tyr Gly lie Ala Ser lie Leu 
20 25 30 

Asp Ser Tyr Gin Cys Thr Ala Glu lie Ser Leu Ala Asp Leu Ala Thr 
35 40 45 

lie Phe Phe Ala Gin Phe Val Gin Glu Ala Thr Tyr Lys Glu Val Ser 
50 55 60 

Lys Met Val Lys Asp Ala Leu Thr Ala lie Glu Lys Pro Thr Gly Asp 
65 70 75 80 

Glu Gin Ser Ser Gly Cys Leu Glu Asn Gin Leu Pro Ala Phe Leu Glu 
85 90 95 

Glu Leu Cys His Glu Lys Glu lie Leu Glu Lys Tyr Gly His Ser Asp 
100 105 " ~ 110 



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Cys Cys Ser Gin Ser Glu Glu Gly Arg His Asn Cys Phe Leu Ala His 
115 120 125 

Lys Lys Pro Thr Pro Ala Ser lie Pro Leu Phe Gin Val Pro Glu Pro 
130 135 140 

Val Thr Ser Cys Glu Ala Tyr Glu Glu Asp Arg Glu Thr Phe Met Asn 
145 ~ 150 155 160 

Lys Phe lie Tyr Glu lie Ala Arg Arg His Pro Phe Leu Tyr Ala Pro 
165 170 175 ' 

Thr lie Leu Leu Trp Ala Ala Arg Tyr Asp Lys lie lie Pro Ser Cys 
180 185 190 

Cys Lys Ala Glu Asn Ala Val Glu Cys Phe Gin Thr Lys Ala Ala Thr 
195 200 205 

Val Thr Lys Glu Leu Arg Glu Ser Ser Leu Leu Asn Gin His Ala Cys 
210 215 220 

Ala Val Met Lys Asn Phe Gly Thr Arg Thr Phe Gin Ala lie Thr Val 
225 230 235 240 

Thr Lys Leu Ser Gin Lys Phe Thr Lys Val Asn Phe Thr Glu lie Gin 
245 250 255 

Lys Leu Val Leu Asp Val Ala His Val His Glu His Cys Cys Arg Gly 
260 265 270 

Asp Val Leu Asp Cys Leu Gin Asp Gly Glu Lys lie Met Ser Tyr lie 
275 280 ~ 285 

Cys Ser Gin Gin Asp Thr Leu Ser Asn Lys lie Thr Glu Cys Cys Lys 
290 295 300 

Leu Thr Thr Leu Glu Arg Gly Gin Cys lie lie His Ala Glu Asn Asp 
305 310 315 320 

Glu Lys Pro Glu Gly Leu Ser Pro Asn Leu Asn Arg Phe Leu Gly Asp 
325 330 335 

Arg Asp Phe Asn Gin Phe Ser Ser Gly Glu Lys Asn lie Phe Leu Ala 
340 345 350 

Ser Phe Val His Glu Tyr Ser Arg Arg His Pro Gin Leu Ala Val Ser 
355 360 365 

Val lie Leu Arg Val Ala Lys Gly Tyr Gin Glu Leu Leu Glu Lys Cys 
370 375- 380 

Phe Gin Thr Glu Asn Pro Leu Glu Cys Gin Asp Lys Gly Glu Glu Glu 
385 390 395 400 

Leu Gin Lys Tyr He Gin Glu Ser Gin Ala Leu Ala Lys Arg Ser Cys 
405 410 415 



Gly Leu Phe Gin Lys Leu Gly Glu Tyr Tyr Leu Gin Asn Ala Phe Leu 



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420 425 430 

Val Ala Tyr Thr Lys Lys Ala Pro Gin Leu Thr Ser Ser Glu Leu Met 
435 " 440 445 

Ala lie Thr Arg Lys Met Ala Ala Thr Ala Ala Thr Cys Cys Gin Leu 
450 455 460 

Ser Glu Asp Lys Leu Leu Ala Cys Gly Glu Gly Ala Ala Asp lie lie 
465 470 475 480 

lie Gly His Leu Cys He Arg His Glu Met Thr Pro Val Asn Pro Gly 
485 490 495 

Val Gly Gin Cys Cys Thr Ser Ser Tyr Ala Asn Arg Arg Pro Cys Phe 
500 "* 505 510 

Ser Ser Leu Val Val Asp Glu Thr Tyr Val Pro Pro Ala Phe Ser Asp 
515 520 525 

Asp Lys Phe He Phe His Lys Asp Leu Cys Gin Ala Gin Gly Val Ala 
530 535 540 

Leu Gin Thr Met Lys Gin Glu Phe Leu He Asn Leu Val Lys Gin Lys 
545 550 555 560 

Pro Gin He Thr Glu Glu Gin Leu Glu Ala Val He Ala Asp Phe Ser 
565 570 575 

Gly Leu Leu Glu Lys Cys Cys Gin Gly Gin Glu Gin Glu Val Cys Phe 
580 585 590 

Ala Glu Glu Gly Gin Lys Leu He Ser Lys Thr Arg Ala Ala Leu Gly 
595 * 600 605 

Val 



(2) INFORMATION FOR SEQ ID NO:5: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 474 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: protein 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 5: 

Met Lys Arg Val Leu Val Leu Leu Leu Ala Val Ala Phe Gly His Ala 
15 10 15 

Leu Glu Arg Gly Arg Asp Tyr Glu Lys Asn Lys Val Cys Lys Glu Phe 
20 25 30 



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Ser His Leu Gly Lys Glu Asp Phe Thr Ser Leu Ser Leu Val Leu Tyr 
35 40 45 

.Ser Arg Lys Phe Pro Ser Gly Thr Phe Glu Gin Val Ser Gin Leu Val 
50 55 60 

Lys Glu Val Val Ser Leu Thr Glu Ala Cys Cys Ala Glu Gly Ala Asp 
65 70 75 80 

Pro Asp Cys Tyr Asp Thr Arg Thr Ser Ala Leu Ser Ala Lys Ser Cys 
85 90 95 

Glu Ser Asn Ser Pro Phe Pro Val His Pro Gly Thr Ala Glu Cys Cys 
100 105 110 

Thr Lys Glu Gly Leu Glu Arg Lys Leu Cys Met Ala Ala Leu Lys His 
115 ~ 120 125 

Gin Pro Gin Glu Phe Pro Thr Tyr Val Glu Pro Thr Asn Asp Glu lie 
130 135 140 

Cys Glu Ala Phe Arg Lys Asp Pro Lys Glu Tyr Ala Asn Gin Phe Met 
145 150 155 160 

Trp Glu Tyr Ser Thr Asn Tyr Gly Gin Ala Pro Leu Ser Leu Leu Val 
165 170 175 

Ser Tyr Thr Lys Ser Tyr Leu Ser Met Val Gly Ser Cys Cys Thr Ser 
180 185 190 

Ala Ser Pro Thr Val Cys Phe Leu Lys Glu Arg Leu Gin Leu Lys His 
195 200 205 

Leu Ser Leu Leu Thr Thr Leu Ser Asn Arg Val Cys Ser Gin Tyr Ala 
210 215 220 

Ala Tyr Gly Glu Lys Lys Ser Arg Leu Ser Asn Leu lie Lys Leu Ala 
225 230 235 240 

Gin Lys Val Pro Thr Ala Asp Leu Glu Asp Val Leu Pro Leu Ala Glu 
245 250 255 

Asp He Thr Asn He Leu Ser Lys Cys Cys Glu Ser Ala Ser Glu Asp 
260 265 270 

Cys Met Ala Lys Glu Leu Pro Glu His Thr Val Lys Leu Cys Asp Asn 
275 280 285 

Leu Ser Thr Lys Asn Ser Lys Phe Glu Asp Cys Cys Gin Glu Lys Thr 
290 295 • 300 

Ala Met Asp Val Phe Val Cys Thr Tyr Phe Met Pro Ala Ala Gin Leu 
305 " 310 315 320 

Pro Glu Leu Pro Asp Val Glu Leu Pro Thr Asn Lys Asp Val Cys Asp 
325 330 335 

Pro Gly Asn Thr Lys Val Met Asp Lys Tyr Thr Phe Glu Leu Ser Arg 



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340 345 350 

Arg Thr His Leu Pro Glu Val Phe Leu Ser Lys Val Leu Glu Pro Thr 
355 360 ~ 365 

Leu Lys Ser Leu Gly Glu Cys Cys Asp Val Glu Asp Ser Thr Thr Cys 
370 375 380 

Phe Asn Ala Lys Gly Pro Leu Leu Lys Lys Glu Leu Ser Ser Phe lie 
385 " 390 395 400 

Asp Lys Gly Gin Glu Leu Cys Ala Asp Tyr Ser Glu Asn Thr Phe Thr 
405 410 415 

Glu Tyr Lys Lys Lys Leu Ala Glu Arg Leu Lys Ala Lys Leu Pro Asp 
420 425 430 

Ala Thr Pro Lys Glu Leu Ala Lys Leu Val Asri Lys Arg Ser Asp Phe 
435 440 445 

Ala Ser Asn Cys Cys Ser lie Asn Ser Pro Pro Leu Tyr Cys Asp Ser 
450 455 460 

Glu He Asp Ala Glu Leu Lys Asn He Leu 
465 470 

(2) INFORMATION FOR SEQ ID NO: 6: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 35 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 6: 

Leu Pro Thr Gin Pro Arg Asp He Glu Asn Phe Xaa Ser Thr Gin Lys 
15 10 15 

Phe He Glu Asp Asn He Glu Tyr He Thr He He Ala Phe Ala Gin 
20 25 30 

Tyr Val Gin 
35 

(2) INFORMATION FOR SEQ ID NO: 7:- 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 6 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



WO 95/27059 PCTYUS95/04075 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO:7: 

Tyr His Tyr Leu lie Arg 
1 5 

(2) INFORMATION FOR SEQ ID NO: 8: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 7 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

<ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 8: 

Phe Thr Phe Glu Tyr Ser Arg 
1 5 

(2) INFORMATION FOR SEQ ID NO: 9: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 15 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 
<D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 9: 

Phe Thr Asp Ser Glu Asn Val Cys Gin Glu Arg Asp Ala Asp Pro 
1 5 10 15 

(2) INFORMATION FOR SEQ ID NO: 10: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 10 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 10: 

lie Val Gin lie Tyr Lys Asp Leu Leu Arg 
1 5 10 



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— / v— 



PCT/US95/04075 



(2) INFORMATION FOR SEQ ID NO: 11: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 15 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO:ll: 

lie Ala Pro Gin Leu Ser Thr Glu Glu Leu Val Ser Leu Gly Glu 
15 10 15 

(2) INFORMATION FOR SEQ ID NO:12: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 12 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 12: 

Arg His Pro Asp Leu Ser lie Pro Glu Leu Leu Arg 
1 5 10 

(2) INFORMATION FOR SEQ ID NO: 13: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 13 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 13: 

Glu Ser Leu Leu Asn His Phe- Leu Tyr Glu Val Ala Arg 
1 5 10 

(2) INFORMATION FOR SEQ ID NO: 14: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 25 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 



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PCT/US95/04075 



(D) TOPOLOGY: unknown 
(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 14: 

Arg Asn Pro Phe Val Phe Ala Pro Thr Leu Leu Thr Val Ala Val His 
1 5 10 15 

Phe Glu Glu Val Ala Lys Ser Cys Cys 
20 25 

(2) INFORMATION FOR SEQ ID NO: 15: 

<i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 7 amino acids 

(B) TYPE: amino acid 

(C) STRAND ED NESS : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE .TYPE : peptide 



<xi) SEQUENCE DESCRIPTION: SEQ ID NO:15: 

Gin Lys Phe lie Glu Asp Asn 
1 5 

(2) INFORMATION FOR SEQ ID NO: 16: 

(i) SEQUENCE CHARACTERISTICS:* 

(A) LENGTH: 33 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 16: 
ACGCTGAATT CGCCARAART TYATHGARGA YAA 33 
(2) INFORMATION FOR SEQ ID NO: 17: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 7 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



WO 95/27059 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 17 

. lie Val Gin lie Tyr Lys Asp 
1 5 

(2) INFORMATION FOR SEQ ID NO: 18: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 34 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 18 
ACGCTAAGCT TGCRTCYTTR TADATYTGNA CDAT 
(2) INFORMATION FOR SEQ ID NO: 19: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 7 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 19 

Asp Asn lie Glu Tyr He Thr 
1 5 

(2) INFORMATION FOR SEQ ID NO:20: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 33 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 20 
ACGCTGAATT CGCGAYAAYA THGARTAYAT HAC 
(2) INFORMATION FOR SEQ ID NO: 21: 
(i) SEQUENCE CHARACTERISTICS: 



WO 95/27059 



(A) LENGTH: 6 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



{xi) SEQUENCE DESCRIPTION: SEQ ID NO: 21 

Phe Thr Phe Glu Tyr Ser 
1 5 

(2) INFORMATION FOR SEQ ID NO: 22: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 31 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE . TYPE : cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 22 

ACGCTAAGCT TGCNGARTAY TCRAANGTRA A 

(2) INFORMATION FOR SEQ ID NO: 23: 

(i) SEQUENCE CHARACTERISTICS: 
<A) LENGTH: 18 base pairs 

(B) TYPE: nucleic acid 

( C ) S TRANDEDNES S : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 23 
TATGTGCTAT GGAGGGGC 
(2) INFORMATION FOR SEQ ID NO: 24: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 18 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



WO 95/27059 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 24 
CAACCCTGCT GTGGACCA 
(2) INFORMATION FOR SEQ ID NO: 25: 

(i) SEQUENCE CHARACTERISTICS : 

(A) LENGTH: 22 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS : unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 25 
GCACATATGT TTTATCAGCT TT 
(2) INFORMATION FOR SEQ ID NO: 26: 

(i) SEQUENCE CHARACTERISTICS : 

(A) LENGTH: 38 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 26 

TCACCTCTAG ACCACCATGA AACTACTAAA ACTTACAG 

(2) INFORMATION FOR SEQ ID NO: 27: 

(i) SEQUENCE CHARACTERISTICS: 
(A) LENGTH: 24 base pairs 
(6) TYPE : nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: cDNA 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 27 
AATTTCTCAG GAGATCTTTG TATA 
(2) INFORMATION FOR SEQ ID NO: 28: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 24 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 



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PCT/US95/04075 



(D) TOPOLOGY: unknown 
(ii) MOLECULE TYPE: cDNA 

(xi) SEQUENCE DESCRIPTION: SEQ ID NO:28: 
AAATATACAA AGATCTCCTG AGAA 24 
(2) INFORMATION FOR SEQ ID NO: 29: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 31 base pairs 

(B) TYPE: nucleic acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

<ii) MOLECULE TYPE: cDNA 

(xi) SEQUENCE DESCRIPTION: SEQ ID NO:29: 
TCCCGGTCGA CTCAGTTGCC AATTTTTGGA C 31 
(2) INFORMATION FOR SEQ ID NO:30: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 16 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 30: 

Asp Leu Ser Leu Arg Glu Gly Lys Phe Thr Asp Ser Glu Asn Val Cys 
1 5 10 15 



(2) INFORMATION FOR SEQ ID NO: 31: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 14 amino acids 

(B) TYPE: amino acid 

( C ) S TRANDEDNES S : unknown 

(D ) TOPOLOGY : unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 31: 



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PCT/US95/04075 



Glu Lys Leu Val Lys Asp Met Val Glu Tyr Lys Asp Arg Cys 
1 5 10 

(2) INFORMATION FOR SEQ ID NO: 32: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 17 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 32: 

Cys lie lie Asn Ser Asn Lys Asp Asp Arg Pro Lys Asp Leu Ser Leu 
1 5 10 15 

Arg 



(2) INFORMATION FOR SEQ ID NO: 33: 

(i) SEQUENCE CHARACTERISTICS: 

(A) LENGTH: 16 amino acids 

(B) TYPE: amino acid 

(C) STRANDEDNESS: unknown 

(D) TOPOLOGY: unknown 

(ii) MOLECULE TYPE: peptide 



(xi) SEQUENCE DESCRIPTION: SEQ ID NO:33: 

Cys Gin Glu Arg Asp Ala Asp Pro Asp Thr Phe Phe Ala Lys Phe Thr 
15 10 15 



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PCT/DS95/04075 



The embodiments of the invention in which an 
exclusive property or privilege is claimed are defined as 
follows : 



5 1. A purified and isolated polynucleotide 

encoding AFM polypeptide or a variant thereof possessing a 
biological activity specific to AFM. 

2 . The polynucleotide of claim 1 which is a 
1 0 DNA sequence . 

3. The DNA sequence according to claim 2 which 
is a cDNA sequence or a biological replica thereof. 

15 4. The cDNA sequence of claim 3, which encodes 

AFM. 

5. The DNA sequence according to claim 3 which 
is a genomic DNA sequence or a biological replica thereof. 

20 

6. The DNA se.quence of claim 3 further 
including an endogenous expression control DNA sequence. 

7 . The DNA sequence according to claim 3 which 
2 5 is a wholly or partially chemically synthesized DNA 

sequence or a biological replica thereof. 

8. A DNA vector comprising a DNA sequence 
according to claim 3 . 

30 

9. The vector of claim 8 wherein said DNA 
sequence is operatively linked to an expression control DNA 
sequence . 



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10. A host cell stably transformed or 
•transfected with a DNA sequence according to claim 3 in a 
manner allowing the expression in said host cell of AFM 

5 polypeptide or a variant thereof possessing a biological 
activity specific to AFM. 

11. A method for producing AFM polypeptide or a 
variant thereof possessing a biological activity specific 

10 to AFM, said method comprising growing a host cell 

according to claim 8 in a suitable nutrient medium and 
isolating AFM polypeptide or variant thereof from said cell 
or the growth medium. 

15 12. Purified and isolated AFM polypeptide or a 

variant thereof possessing a biological activity specific 
to AFM. 

13. The polypeptide of claim 12 comprising 
20 amino acid residues 1 through 578 of FIG 2. 

14 . The polypeptide of claim 12 comprising 
residues -23 through 578 of FIG 2. 

25 15. Purified and isolated AFM polypeptide 

complexed with Apolipoprotein Al. 

16. An antibody specific for AFM or a variant 

thereof. 

30 

17. A monoclonal antibody according to claim 

16. 



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18. A humanized antibody according to claims 16 

or 17. 

19. A method for modulating a biological 

5 activity of AFM comprising contacting AFM with an antibody 
according to claim 16 or 17. 

20. A method for detecting the capacity of a 
cell to synthesize AFM comprising hybridizing detectable 

1 0 polynucleotide encoding AFM or a fragment thereof with RNA 
of said cell. 

21. A method for detecting the capacity of a 
cell to synthesize AFM comprising reacting an antibody 

15 according to claim 16 with polypeptides produced by said 
cell. 

22. A method for determining the presence of 
AFM in a sample body fluid, comprising contacting the body ■ 

20 fluid with an antibody according to Claim 16. 

23. An antisense polynucleotide for a 
polynucleotide encoding AFM. 

25 24. An antisense polynucleotide for a DNA 

specifying an endogenous expression control DNA sequence of 
AFM. 

25. A hybrid fusion polypeptide comprising, at 
3 0 its amino terminal, an AFM polypeptide or a variant thereof 
possessing a biological- activity specific to AFM and, at 
its carboxy terminal f at least one constant domain of an 
immunoglobulin heavy chain or allelic variant thereof. 



! 



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PCT/US95/04075 



26. A polynucleotide encoding a hybrid fusion 
protein according to claim 25. 

5 27. A DNA sequence encoding a polypeptide 

having a biological property specific for AFM and selected 
from the group consisting of : 

(a) the DNA sequence set out in FIG 1; 

(b) a DNA which hybridizes under stringent 
0 conditions to the DNA of (a) ; and 

(c) a DNA sequence which, but for the 
redundancy of the genetic code, would hybridize under 
stringent conditions to a DNA sequence of (a) or (b) . 



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1/12 

FIG. IA 



CCCCGAGTCTCTGCGCCTTCACATAGTTGTCACAGGACTAAAGCAAATTGATCCAGGGGG 6 0 

AAACACTGTAGACCGTGTATATAAAAACACTCTATAAACTGCAATGCTCAATTCTTAGTA 12 0 

TAACTATTGTTGTTGTATTGATATTTATTAGTATTGGTGCTCACAAAAAGAGTCTAAATT 18 0 

CCATAAGTCTTTATATTC AGGCTACTCTTTATTTTTGAAAACTC ATTTTCTATC ACCTTT 240 

TTCTATTTTACTCCATATTGAGGCCTCATAAATCCAATTTTTTATTTCTTTCTTTTGTAA 300 

m k 1 1 k 1 t g f i f f 1 f - f -21 

ATGTGGTTTCTACAAAGATGAAACTACTAAAACTTACAGGTTTTATTTTTTTCTTGTTTT 360 

* 

ItesltLPTQPRDIENFNST 14 

TTTTGACTGAATCCCTAACCCTGCCCACACAACCTCGGGATATAGAGAACTTCAATAGTA 420 

QKFIEDNIEYITIIAFAQYV 34 

CTCAAAAATTTATAGAAGATAATATTGAATACATCACCATCATTGC ATTTGCTCAGTATG 480 

QEAT FEEMEKLVKDMVEYKD 54 

TTCAGGAAGCAACCTTTGAAGAAATGGAAAAGCTGGTGAAAGACATGGTAGAATACAAAG 540 

RCMADKTLPECSKLPNNVLQ 74 

ACAGATGTATGGCTGACAAGACGCTCCCAGAGTGTTCAAAATTACCTAATAATGTTTTAC 600 

* 

EKICAM.EGLPQKHNFSHCCS 94 

AGGAAAAAATATGTGCTATGGAGGGGCTGCCACAAAAGCATAATTTCTCACACTGCTGCA 660 

KVDAQRRLCFFYNKKSDVGF 114 

GTAAGGTTGATGCTCAAAGAAGACTCTGTTTCTTCTATAACAAGAAATCTGATGTGGGAT 720 

LPPFPTLDPEEKCQAYESNR 134 

TTCTGCCTCCTTTCCCTACCCTGGATCCCGAAGAGAAATGCCAGGCTTATGAAAGTAACA 780 

ESLLNHFLYEVARRNPFVFA 154 

GAGAATCCCTTTTAAATCACTTTTTATATGAAGTTGCCAGAAGGAACCCATTTGTCTTCG 840 

PTLLTVAVHFEEV AKSCCEE 174 

CCCCTACACTTCTAACTGTTGCTGTTCATTTTGAGGAGGTGGCCAAATCATGTTGTGAAG 900 

QNKVNCLQTRAIPVTQYLKA 194 

AACAAAACAAAGTCAACTGCCTTCAAACAAGGGCAATACCTGTCACACAATATTTAAAAG 960 

FS SYQKHVC GALLKFGTKVV 214 

CATTTTCTTCTTATCAAAAACATGTCTGTGGGGCACTTTTGAAATTTGGAACCAAAGTTG 1020 

HFIYIAILSQKFPKIEFKEL 234 

TACACTTTATATATATTGCGATACTCAGTCAAAAATTCCCCAAGATTGAATTTAAGGAGC 1080 

ISLVEDVSSNYDGCCEGDVV 254 

TTATTTCTCTTGTAGAAGATGTTTCTTCCAACTATGATGGATGCTGTGAAGGGGATGTTG 1140 



PCT/US95/04075 

2/12 



FIG. IB 

QC I RDTSKVMNH IC SKQDS I 274 

TGCAGTGCATCCGTGACACGAGCAAGGTTATGAACCATATTTGTTCAAAACAAGATTCTA 1200 

SSKIKECCEKKIPERGQCII 294 

TCTCCAGCAAAATCAAAGAGTGCTGTGAAAAGAAAATACCAGAGCGCGGCCAGTGCATAA 1260 

NSNKDDRPKDLSLREGKFTD 314 

TTAACTCAAACAAAGATGATAGACCAAAGGATTTATCTCTAAGAGAAGGAAAATTTACTG 1320 

SE NVCQERDADP DTFFAKFT 334 

ACAGTGAAAATGTGTGTCAAGAACGAGATGCTGACCCAGACACCTTCTTTGCGAAGTTTA 1380 

FEYSRRH PDLSIPELLRIVQ 354 

CTTTTGAATACTCAAGGAGACATCCAGACCTGTCTATACCAGAGCTTTTAAGAATTGTTC 1440 

IYKDLLRNCCNTENPPGCYR 374 

AAATATACAAAGATCTCCTGAGAAATTGCTGCMCACAGAAAACCCTCCAGGTTGTTACC 1500 

* 

YAEDKFNETTEKSLKMVQQE 394 

GTTACGCGGAAGACAAATTCAATGAGACAACTGAGAAAAGCCTCAAGATGGTACAACAAG 1560 

CKHFQNLGKDGLKYH YLIRL 414 

AATGTAAACATTTCCAGAATTTGGGGAAGGATGGTTTGAAATACCATTACCTCATCAGGC 1 62 0 

TKIAPQ LSTEELVSLGEKMV 434 

TCACGAAGATAGCTCCCCAACTCTCCACTGAAGAACTGGTGTCTCTTGGCGAGAAAATGG 1680 

TAFTTCCTLSEEFACVDNLA 454 

TGACAGCTTTCACTACTTGCTGTACGCTAAGTGAAGAGTTTGCCTGTGTTGATAATTTGG 1740 

* 

DLVFGELCGVNENRTINPAV 474 

CAGATTTAGTTTTTGGAGAGTTATGTGGAGTAAATGAAAATCGAACTATCAACCCTGCTG 1800 

DHCCKTNFAFRRPCFESLKA 494 

TGGACCACTGCTGTAAAACAAACTTTGCCTTCAGAAGGCCCTGCTTTGAGAGTTTGAAAG 1860 

DKTYVPPPFSQDLFTFHADM 514 

CTGATAAAACATATGTGCCTCCACCTTTCTCTCAAGATTTATTTACCTTTCACGCAGACA 1920 

CQSQNEELQRKTDRFLVNLV 534 

TGTGTCAATCTCAGAATGAGGAGCTTCAGAGGAAGACAGACAGGTTTCTTGTCAACTTAG 1980 

KLKHEL.TDEELQSLFTNFAN 554 

TGAAGCTGAAGCATGAACTCACAGATGAAGAGCTGCAGTCTTTGTTTACAAATTTCGCAA 2040 

VVDKCCKAESP EVCFNEESP 574 

ATGTAGTGGATAAGTGCTGCAAAGCAGAGAGTCCTGAAGTCTGCTTTAATGAAGAGAGTC 2100 



SUBSTITUTE SHEET (RULE 3S) 



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PCT/US95/04075 



3/12 



FIG. IC 

K I G N J>H 

CAAAAATTGGCAACTGAAGCCAGCTGCTGGAGATATGTAAAGAAAAAAGCACCAAAGGGA 2160 

AGGCTTCCTATCTGTGTGGTGATGAATCGCATTTCCTGAGAACAAAATAAAAGGATTTTT 2220 

CTGTAACTGTCACCTGAAATAATACATTGCAGCAAGCAATAAACACAACATTTTGTAAAG 2280 

TTAAAAA 2287 



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A.' CLASSIFICATION OF SUBJECT MATTER . ... „ A - 1/ - - /1Q nmUOO/CS 

IPC 6 C12N15/12 C12N15/62 C07K14/47 C07K16/18 G01N33/53 



According to International Patent Classification (IPC) or to both national classification and IPC 



B. FIELDS SEARCHED 



Minimum documentation searched (classification system followed by classification symbols) 

IPC 6 C07K 



Documentation searched other than minimum documentation to the extent that such documents arc included in the fields searched 



Electronic data base consulted during the international search (name of data base and, where practical, search terms used) 



C. DOCUMENTS CONSIDERED TO BE RELEVANT 



Category * Citation of document, with indication, where appropriate, of the relevant passages 



Relevant to claim No. 



THE JOURNAL OF BIOLOGICAL CHEMISTRY, 
vol. 269, no. 8, 25 February 1994 
pages 5481-5484, 

B6LANGER ET AL 'NEW ALBUMIN GENE 3' 
ADJACENT TO THE ALPHA1-FET0PR0TEIN LOCUS' 
see the whole document 

THE JOURNAL OF BIOLOGICAL CHEMISTRY, 
vol. 269, no. 27, 8 July 1994 
pages 18149-18154, 

LICHENSTEIN ET AL 'AFAMIN IS A NEW MEMBER 
OF THE ALBUMIN, ALPHA-FETOPROTEIN, AND 
VITAMIN D-BINDING PROTEIN GENE FAMILY' 
see the whole document 

-/~ 



1-27 



1-27 



m 



Further documents arc listed in the continuation of box C. 



m 



Patent family members are listed in annex. 



* Special categories of cited documents : 

# A' document defining the general state of the art which is not 

considered to be of particular relevance 
*E* earlier document but published on or after the international 

filing date 

*L* document which may throw doubts on priority daim(s) or • 
which is cited to establish the publication date of another 
citation or other special reason (as specified) 

*0 # document referring to an oral disclosure, use, exhibition or 
other means 

# P* document published prior to the international filing date but 
later the priority date claimed 



*T* later document published after the international filing date 
or priority date and not in conflict with the application but 
cited to understand the principle or theory underlying the 
invention 

'X' document of particular relevance; the claimed invention 
cann ot be considered novel or cannot be considered to 
involve an inventive step when the document is taken alone 

* Y* document of particular relevance; the daimed invention 
cann ot be considered to involve an inventive step when the 
document is combined with one or more other such docu- 
ments, such combination being obvious to a person skilled 
in the art 

*&* document member of the same patent family 



Date of the actual completion of the international search 

2 August 1995 



Date of mailing of the international search report 



1 0. 08. 95 



Name and mailing address of the ISA 

European Patent Office, P.B. 581 8 Patenuaan 2 
NL * 2280 HV Rijswijk 
Td. (+ 31-70) 340-2040, TX. 31 651 epo nl, 
Fax ( + 31-70) 34O-3016 



Authorized officer 



Sitch> W 



Form PCT/ISA/310 (i 



id ihMt) (July 1993) 



{ PCT/US 95/04075 



C^Continuation) DOCUMENTS CONSIDERED TO BE RELEVANT 



Category* 


Citation of document, with indication, where appropriate, of the relevant passages 




E 


WO, A, 95 11308 (AMGEN INC) 27 April 1995 

see page 6, line 20 - page 35 

see SEQ ID NOS: 23 and 24 

see page 41 - page 43; example 4 


1-H.16, 
27 



Form PCT/ISA/310 (continumtioo of ucond theet) (July 1993) 



Patent document 
cited in search report 



Publication 
date 



PCT/US 95/04075 



Patent family 
member(s) 



Publication 
date 



WO-A-9511308 



27-04-95 



AU-B- 7979194 



08-05-95 



Form PCT/ISA/310 (paUM family annex) (July 1993) 



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